Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 ENSAP3-201ENST00000312710 333 ntBASIC4.87□□□□□ -1.63
CENPAP49450 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CENPAP49450 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.87□□□□□ -1.63
CENPAP49450 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CENPAP49450 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CENPAP49450 RN7SKP153-201ENST00000365026 316 ntBASIC4.87□□□□□ -1.63
CENPAP49450 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 OR1L6-202ENST00000373684 1044 ntBASIC4.87□□□□□ -1.63
CENPAP49450 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 MIR708-201ENST00000390708 88 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AF228730.1-201ENST00000397972 663 ntBASIC4.87□□□□□ -1.63
CENPAP49450 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.87□□□□□ -1.63
CENPAP49450 HIGD1AP15-201ENST00000416198 280 ntBASIC4.87□□□□□ -1.63
CENPAP49450 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 AL133173.1-201ENST00000423458 397 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AL662874.1-201ENST00000426065 230 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 RPL19P16-201ENST00000433839 588 ntBASIC4.87□□□□□ -1.63
CENPAP49450 TCEA1P3-201ENST00000443005 880 ntBASIC4.87□□□□□ -1.63
CENPAP49450 VN1R25P-201ENST00000443385 738 ntBASIC4.87□□□□□ -1.63
CENPAP49450 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.87□□□□□ -1.63
CENPAP49450 OR52E3P-201ENST00000452083 936 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 VDAC2P4-201ENST00000452925 711 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 SNORD11.1-201ENST00000459482 85 ntBASIC4.87□□□□□ -1.63
CENPAP49450 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CENPAP49450 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 AC105233.1-201ENST00000498840 781 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC109464.1-201ENST00000511091 819 ntBASIC4.87□□□□□ -1.63
CENPAP49450 SCARNA20.4-201ENST00000516969 131 ntBASIC4.87□□□□□ -1.63
CENPAP49450 NRBF2P4-201ENST00000520874 850 ntBASIC4.87□□□□□ -1.63
CENPAP49450 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 OR8I1P-201ENST00000529291 931 ntBASIC4.87□□□□□ -1.63
CENPAP49450 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 LRRC34P1-201ENST00000542742 915 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.87□□□□□ -1.63
CENPAP49450 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 DPPA2P4-201ENST00000563717 878 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 AC018552.3-201ENST00000567416 561 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 RN7SL290P-201ENST00000578661 300 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.87□□□□□ -1.63
CENPAP49450 AC022022.2-201ENST00000602989 360 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC123786.2-201ENST00000603459 275 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AL357094.1-201ENST00000603845 844 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC008115.3-201ENST00000614874 549 ntBASIC4.87□□□□□ -1.63
CENPAP49450 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.87□□□□□ -1.63
CENPAP49450 AC006386.1-201ENST00000619436 415 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC091932.2-201ENST00000623014 291 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AC024595.1-201ENST00000623088 387 ntBASIC4.87□□□□□ -1.63
CENPAP49450 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 AL133268.1-201ENST00000405676 1401 ntBASIC4.87□□□□□ -1.63
CENPAP49450 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CENPAP49450 AC099786.3-201ENST00000565735 1410 ntBASIC4.87□□□□□ -1.63
CENPAP49450 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CENPAP49450 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.87□□□□□ -1.63
CENPAP49450 YES1P1-201ENST00000418510 1628 ntBASIC4.86□□□□□ -1.63
CENPAP49450 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.86□□□□□ -1.63
CENPAP49450 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CENPAP49450 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CENPAP49450 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CENPAP49450 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CENPAP49450 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CENPAP49450 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
CENPAP49450 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.86□□□□□ -1.63
CENPAP49450 ANKRD36P1-201ENST00000344424 659 ntBASIC4.86□□□□□ -1.63
CENPAP49450 RNU4-2-201ENST00000365668 141 ntBASIC4.86□□□□□ -1.63
CENPAP49450 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.86□□□□□ -1.63
CENPAP49450 RNU6-224P-201ENST00000384055 107 ntBASIC4.86□□□□□ -1.63
CENPAP49450 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CENPAP49450 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.86□□□□□ -1.63
CENPAP49450 HMGN1P20-201ENST00000411849 300 ntBASIC4.86□□□□□ -1.63
CENPAP49450 OR6E1P-201ENST00000414424 923 ntBASIC4.86□□□□□ -1.63
CENPAP49450 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.86□□□□□ -1.63
CENPAP49450 RPS3P2-201ENST00000421346 701 ntBASIC4.86□□□□□ -1.63
CENPAP49450 RPS12P5-201ENST00000423449 371 ntBASIC4.86□□□□□ -1.63
CENPAP49450 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms