Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.8□□□□□ -1.48
TM4SF4P48230 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF4P48230 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF4P48230 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 RPL12P34-201ENST00000424532 479 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 MRPS21P2-201ENST00000424704 264 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 ARL5AP2-201ENST00000444698 533 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 NOP56P2-201ENST00000447491 769 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 RPL7AP52-201ENST00000458096 790 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.8□□□□□ -1.48
TM4SF4P48230 RPL23AP56-201ENST00000460778 453 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.8□□□□□ -1.48
TM4SF4P48230 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 UBE2V1P12-201ENST00000503954 474 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF4P48230 AC097173.1-201ENST00000505862 819 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.8□□□□□ -1.48
TM4SF4P48230 RPS27AP18-201ENST00000515536 459 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 HMGB1P23-201ENST00000518743 568 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 OR5M2P-201ENST00000529003 936 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 OR4A43P-201ENST00000532938 908 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF4P48230 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF4P48230 ZNF971P-201ENST00000562068 1249 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 KPNA2P3-201ENST00000584190 848 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 CCDC58P3-201ENST00000590792 430 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 AC005377.1-201ENST00000605126 456 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 Z95327.3-201ENST00000610385 572 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 AL050303.3-201ENST00000613704 284 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF4P48230 AL161637.1-201ENST00000622380 412 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.8□□□□□ -1.48
TM4SF4P48230 AC011944.2-201ENST00000624440 683 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.8□□□□□ -1.48
TM4SF4P48230 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.8□□□□□ -1.48
TM4SF4P48230 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
TM4SF4P48230 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TM4SF4P48230 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.8□□□□□ -1.48
TM4SF4P48230 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.8□□□□□ -1.48
TM4SF4P48230 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TM4SF4P48230 AC104964.3-201ENST00000606115 2860 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 AC104118.1-201ENST00000607625 1589 ntBASIC5.8□□□□□ -1.48
TM4SF4P48230 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TM4SF4P48230 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.79□□□□□ -1.48
TM4SF4P48230 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TM4SF4P48230 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TM4SF4P48230 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 SNORA37-201ENST00000384504 129 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 RSU1P3-201ENST00000412878 835 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AC246680.2-201ENST00000422106 389 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 MTCO3P21-201ENST00000430791 643 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AC000041.1-201ENST00000439655 175 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AC002542.1-201ENST00000440683 193 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 ARL2BPP10-201ENST00000446487 531 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.79□□□□□ -1.48
TM4SF4P48230 NIP7P2-201ENST00000485801 544 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AC022133.1-201ENST00000490961 571 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TM4SF4P48230 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AC093227.2-201ENST00000589357 285 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 RPL12P25-202ENST00000598100 674 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AL022067.1-201ENST00000602426 454 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AC055764.2-201ENST00000610089 670 ntBASIC5.79□□□□□ -1.48
TM4SF4P48230 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.79□□□□□ -1.48
TM4SF4P48230 AC139769.3-201ENST00000618383 175 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms