Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC13P31276 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
HOXC13P31276 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC13P31276 HSPD1P16-201ENST00000402302 394 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 MTND4LP7-201ENST00000431728 294 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC13P31276 AL031663.1-201ENST00000437445 219 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 AL450023.3-201ENST00000440592 271 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 TXNP5-201ENST00000441043 315 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 BTBD7P2-201ENST00000441962 620 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 CYCSP24-201ENST00000445119 316 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 TCEA1P1-201ENST00000449716 880 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 MTND5P8-201ENST00000449817 1083 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC13P31276 AC103987.1-201ENST00000473394 348 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 OR9N1P-202ENST00000494289 481 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 AC010350.1-201ENST00000504908 231 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 ENPP7P11-201ENST00000505915 627 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC13P31276 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC13P31276 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 AC012339.2-201ENST00000523996 453 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.19□□□□□ -1.58
HOXC13P31276 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC13P31276 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC13P31276 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.19□□□□□ -1.58
HOXC13P31276 SNRPGP1-201ENST00000553864 222 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 NMNAT1P1-201ENST00000554095 876 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC13P31276 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 AL355816.1-201ENST00000607951 118 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 BX005214.3-202ENST00000619809 325 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 AC012414.7-202ENST00000622705 1090 ntBASIC5.19□□□□□ -1.58
HOXC13P31276 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.19□□□□□ -1.58
HOXC13P31276 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC13P31276 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC13P31276 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HOXC13P31276 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.19□□□□□ -1.58
HOXC13P31276 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC13P31276 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC13P31276 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 RNU6-984P-201ENST00000363236 109 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 RNA5SP479-201ENST00000364858 117 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 SNORA66-201ENST00000384792 133 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 LRRC37BP1-201ENST00000398851 714 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXC13P31276 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC13P31276 DNAJC19P7-201ENST00000428811 344 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC13P31276 ZFAND6P1-201ENST00000434138 605 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 RPL7P11-201ENST00000437586 658 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 PRPF38AP2-201ENST00000438179 851 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HOXC13P31276 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC13P31276 TPMTP4-201ENST00000450749 678 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
HOXC13P31276 HMGB3P21-201ENST00000452483 547 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 AC006511.1-201ENST00000470614 315 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 AL161747.1-201ENST00000480068 358 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 AC073073.1-201ENST00000493920 463 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC13P31276 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC13P31276 IGKV2D-10-201ENST00000520194 281 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 VTA1P2-201ENST00000520205 911 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.18□□□□□ -1.58
HOXC13P31276 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC13P31276 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC13P31276 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 AC127024.5-201ENST00000580085 462 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 AC010503.3-201ENST00000594355 540 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.18□□□□□ -1.58
HOXC13P31276 MIR6780A-201ENST00000615089 68 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 AC006213.5-201ENST00000619673 288 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
HOXC13P31276 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.18□□□□□ -1.58
HOXC13P31276 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 AC083843.3-201ENST00000623679 2186 ntBASIC5.18□□□□□ -1.58
HOXC13P31276 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HOXC13P31276 AC093311.1-201ENST00000506586 2021 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms