Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXA13P31271 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXA13P31271 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
HOXA13P31271 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HOXA13P31271 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.34□□□□□ -1.56
HOXA13P31271 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.34□□□□□ -1.56
HOXA13P31271 AL034370.1-201ENST00000397254 1590 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 AC125336.1-201ENST00000508893 2827 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA13P31271 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA13P31271 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC017079.1-201ENST00000333650 415 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA13P31271 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA13P31271 RPS3AP23-201ENST00000401762 784 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 PTGES3P2-201ENST00000407942 482 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA13P31271 MTCYBP12-201ENST00000440559 1134 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC012512.1-201ENST00000446594 718 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA13P31271 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA13P31271 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA13P31271 RN7SL346P-201ENST00000491561 294 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA13P31271 HAUS1P1-201ENST00000505275 832 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA13P31271 AC092593.2-201ENST00000513866 913 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 AC027338.1-201ENST00000514840 825 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA13P31271 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC093510.2-201ENST00000562820 896 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC021483.2-201ENST00000567415 758 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA13P31271 MIR4715-201ENST00000584117 79 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC074140.1-201ENST00000621617 208 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 AC010435.1-201ENST00000623353 1177 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXA13P31271 AC026523.2-201ENST00000625039 7739 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA13P31271 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXA13P31271 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXA13P31271 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXA13P31271 AL445487.1-201ENST00000415694 1580 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 KARSP3-201ENST00000571212 1504 ntBASIC5.33□□□□□ -1.56
HOXA13P31271 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA13P31271 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA13P31271 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA13P31271 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXA13P31271 AL121950.1-201ENST00000624993 2077 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXA13P31271 AC021146.4-201ENST00000309229 279 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 AL034374.1-201ENST00000406329 351 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 TMBIM7P-201ENST00000418074 855 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 ARL2BPP3-201ENST00000421226 480 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 AC009480.2-201ENST00000422916 432 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA13P31271 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA13P31271 CYCSP42-201ENST00000450823 238 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 CALM1P2-201ENST00000452941 448 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 AC090142.1-201ENST00000465776 462 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 RN7SL860P-201ENST00000473738 223 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 AC104763.1-201ENST00000475274 360 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 RPL23AP73-201ENST00000492507 471 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 CDH12P2-201ENST00000504393 298 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 AC007016.1-201ENST00000512110 244 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 RNU6-1102P-201ENST00000516149 96 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 VTA1P2-201ENST00000520205 911 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 HIGD1AP18-201ENST00000520730 278 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 C1GALT1P3-201ENST00000522049 819 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA13P31271 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXA13P31271 AC023158.1-201ENST00000561632 1025 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA13P31271 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA13P31271 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXA13P31271 RPL12P25-202ENST00000598100 674 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 ZNF92P2-201ENST00000600543 1059 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA13P31271 AC004775.1-201ENST00000607389 753 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXA13P31271 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXA13P31271 AL356274.1-201ENST00000617064 410 ntBASIC5.32□□□□□ -1.56
HOXA13P31271 MIR6810-201ENST00000622701 70 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms