Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 AC092376.2-201ENST00000622621 4116 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 SNORA67-201ENST00000384423 137 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 MTCO2P31-201ENST00000402702 684 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 MIR1286-201ENST00000408112 78 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 MTCO2P8-201ENST00000412213 658 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.92□□□□□ -1.62
ABCD3P28288 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.92□□□□□ -1.62
ABCD3P28288 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.92□□□□□ -1.62
ABCD3P28288 SLC35E1P1-201ENST00000419313 864 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 AC009784.1-201ENST00000426484 460 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.92□□□□□ -1.62
ABCD3P28288 AL031313.1-201ENST00000448435 256 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 DUXAP8-207ENST00000456786 622 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AC018635.1-201ENST00000468292 1030 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 COPS8P2-201ENST00000473228 627 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AC015724.1-201ENST00000478577 156 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 RPS4XP1-201ENST00000482189 787 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 UBA52P7-201ENST00000486088 380 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 GTF2IP9-201ENST00000502460 301 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 IGBP1P4-201ENST00000503202 879 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 PGAM1P13-201ENST00000507497 754 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 HPRT1P1-201ENST00000509498 657 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.92□□□□□ -1.62
ABCD3P28288 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.92□□□□□ -1.62
ABCD3P28288 RFPL4AP5-201ENST00000514977 504 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 RNU6-513P-201ENST00000516104 104 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 RNU6-416P-201ENST00000516265 103 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 LSM3P2-201ENST00000551246 273 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.92□□□□□ -1.62
ABCD3P28288 AC005252.1-201ENST00000604518 1063 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AC027449.1-201ENST00000608890 407 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 DUXAP10-204ENST00000612052 616 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.92□□□□□ -1.62
ABCD3P28288 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.92□□□□□ -1.62
ABCD3P28288 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.92□□□□□ -1.62
ABCD3P28288 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.92□□□□□ -1.62
ABCD3P28288 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.92□□□□□ -1.62
ABCD3P28288 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.92□□□□□ -1.62
ABCD3P28288 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.92□□□□□ -1.62
ABCD3P28288 AC138393.1-206ENST00000540997 1886 ntBASIC4.92□□□□□ -1.62
ABCD3P28288 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
ABCD3P28288 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ABCD3P28288 AC111188.2-201ENST00000529697 1387 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 AL138820.1-201ENST00000617901 5305 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
ABCD3P28288 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
ABCD3P28288 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ABCD3P28288 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ABCD3P28288 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
ABCD3P28288 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ABCD3P28288 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
ABCD3P28288 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.91□□□□□ -1.62
ABCD3P28288 AC005294.1-201ENST00000355509 281 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.91□□□□□ -1.62
ABCD3P28288 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
ABCD3P28288 MIR105-1-201ENST00000385222 81 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 Y_RNA.578-201ENST00000390903 88 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 BTF3P8-201ENST00000414577 526 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.91□□□□□ -1.62
ABCD3P28288 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ABCD3P28288 OSTCP5-201ENST00000425293 453 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ABCD3P28288 AC093655.2-201ENST00000425735 631 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.91□□□□□ -1.62
ABCD3P28288 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.91□□□□□ -1.62
ABCD3P28288 AC104634.1-201ENST00000452720 462 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.91□□□□□ -1.62
ABCD3P28288 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.91□□□□□ -1.62
ABCD3P28288 AP000797.2-201ENST00000475768 606 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 AC079203.1-201ENST00000487972 404 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.91□□□□□ -1.62
ABCD3P28288 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.91□□□□□ -1.62
ABCD3P28288 AP001207.2-201ENST00000519490 539 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 OR7E13P-201ENST00000526052 910 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.91□□□□□ -1.62
ABCD3P28288 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.91□□□□□ -1.62
ABCD3P28288 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.91□□□□□ -1.62
ABCD3P28288 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.91□□□□□ -1.62
ABCD3P28288 NMNAT1P5-201ENST00000559657 841 ntBASIC4.91□□□□□ -1.62
ABCD3P28288 NIFKP8-201ENST00000560500 874 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms