Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CFL2-206ENST00000556161 546 ntTSL 4 BASIC7.23□□□□□ -1.25
RFX1P22670 HSPE1P3-201ENST00000559254 309 ntBASIC7.23□□□□□ -1.25
RFX1P22670 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.23□□□□□ -1.25
RFX1P22670 MIR3682-201ENST00000581338 84 ntBASIC7.23□□□□□ -1.25
RFX1P22670 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.23□□□□□ -1.25
RFX1P22670 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 BNIP3P11-201ENST00000603878 563 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AL359880.1-201ENST00000621879 266 ntBASIC7.23□□□□□ -1.25
RFX1P22670 CR392039.4-201ENST00000624968 501 ntBASIC7.23□□□□□ -1.25
RFX1P22670 MIR6863-201ENST00000636112 90 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
RFX1P22670 AC140479.2-201ENST00000421567 3130 ntBASIC7.23□□□□□ -1.25
RFX1P22670 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 USP9YP4-201ENST00000424401 1745 ntBASIC7.23□□□□□ -1.25
RFX1P22670 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.23□□□□□ -1.25
RFX1P22670 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.23□□□□□ -1.25
RFX1P22670 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.23□□□□□ -1.25
RFX1P22670 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.23□□□□□ -1.25
RFX1P22670 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
RFX1P22670 AC117529.2-201ENST00000512159 2068 ntBASIC7.23□□□□□ -1.25
RFX1P22670 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RFX1P22670 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RFX1P22670 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 FANCD2P2-201ENST00000437591 1400 ntBASIC7.22□□□□□ -1.25
RFX1P22670 RARSP1-201ENST00000542842 1418 ntBASIC7.22□□□□□ -1.25
RFX1P22670 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 RNU6-657P-201ENST00000383904 107 ntBASIC7.22□□□□□ -1.25
RFX1P22670 RNU6-533P-201ENST00000384144 107 ntBASIC7.22□□□□□ -1.25
RFX1P22670 SNORD115.1-201ENST00000391109 76 ntBASIC7.22□□□□□ -1.25
RFX1P22670 MTCO3P40-201ENST00000392516 676 ntBASIC7.22□□□□□ -1.25
RFX1P22670 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 OR7E101P-201ENST00000400428 513 ntBASIC7.22□□□□□ -1.25
RFX1P22670 MIR320C1-201ENST00000408566 88 ntBASIC7.22□□□□□ -1.25
RFX1P22670 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 IGLV3-4-201ENST00000432300 244 ntBASIC7.22□□□□□ -1.25
RFX1P22670 USP12PX-201ENST00000432383 1057 ntBASIC7.22□□□□□ -1.25
RFX1P22670 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 AC098614.3-201ENST00000438957 440 ntBASIC7.22□□□□□ -1.25
RFX1P22670 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 MTND6P13-201ENST00000443510 523 ntBASIC7.22□□□□□ -1.25
RFX1P22670 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 AC144530.1-201ENST00000452862 555 ntBASIC7.22□□□□□ -1.25
RFX1P22670 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 KCTD9P5-201ENST00000504141 1170 ntBASIC7.22□□□□□ -1.25
RFX1P22670 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 OR4R3P-201ENST00000525084 838 ntBASIC7.22□□□□□ -1.25
RFX1P22670 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.22□□□□□ -1.25
RFX1P22670 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC7.22□□□□□ -1.25
RFX1P22670 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.22□□□□□ -1.25
RFX1P22670 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.22□□□□□ -1.25
RFX1P22670 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 MIR5186-201ENST00000577504 120 ntBASIC7.22□□□□□ -1.25
RFX1P22670 RN7SL753P-201ENST00000581238 290 ntBASIC7.22□□□□□ -1.25
RFX1P22670 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC7.22□□□□□ -1.25
RFX1P22670 AC089999.3-201ENST00000622440 577 ntBASIC7.22□□□□□ -1.25
RFX1P22670 AC005514.1-201ENST00000623521 208 ntBASIC7.22□□□□□ -1.25
RFX1P22670 AP003400.3-201ENST00000624904 346 ntBASIC7.22□□□□□ -1.25
RFX1P22670 AC099654.5-201ENST00000636479 350 ntBASIC7.22□□□□□ -1.25
RFX1P22670 AC096921.2-201ENST00000561507 1916 ntBASIC7.22□□□□□ -1.25
RFX1P22670 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RFX1P22670 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.22□□□□□ -1.25
RFX1P22670 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms