Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.18□□□□□ -1.58
COL2A1P02458 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL2A1P02458 MIR554-201ENST00000384874 96 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL2A1P02458 RPS27AP11-201ENST00000402798 447 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 OR8G2P-201ENST00000412796 908 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 BX119904.3-201ENST00000428194 957 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.18□□□□□ -1.58
COL2A1P02458 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.18□□□□□ -1.58
COL2A1P02458 VN1R32P-201ENST00000452234 905 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.18□□□□□ -1.58
COL2A1P02458 AL133372.1-201ENST00000493565 745 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 AC010374.1-201ENST00000503762 1237 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.18□□□□□ -1.58
COL2A1P02458 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.18□□□□□ -1.58
COL2A1P02458 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC5.18□□□□□ -1.58
COL2A1P02458 RPL23AP97-201ENST00000568955 471 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL2A1P02458 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 AL354984.3-201ENST00000604803 325 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 AC025175.1-201ENST00000606482 759 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 AC144521.1-201ENST00000607148 956 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 TMEM30CP-203ENST00000637814 1035 ntBASIC5.18□□□□□ -1.58
COL2A1P02458 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.18□□□□□ -1.58
COL2A1P02458 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL2A1P02458 AC106871.1-201ENST00000568324 3102 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 AC068870.3-201ENST00000625077 2536 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.17□□□□□ -1.58
COL2A1P02458 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
COL2A1P02458 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 TRAV35-201ENST00000390462 330 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 RN7SKP33-201ENST00000410942 340 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 EIF4A1P3-201ENST00000411521 244 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.17□□□□□ -1.58
COL2A1P02458 AL157831.1-201ENST00000426134 473 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 AL132765.1-201ENST00000434165 553 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 DDX39BP2-208ENST00000453923 258 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.17□□□□□ -1.58
COL2A1P02458 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.17□□□□□ -1.58
COL2A1P02458 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.17□□□□□ -1.58
COL2A1P02458 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.17□□□□□ -1.58
COL2A1P02458 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.17□□□□□ -1.58
COL2A1P02458 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.17□□□□□ -1.58
COL2A1P02458 RPL7P50-201ENST00000600588 727 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 AL161729.3-201ENST00000603533 673 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 IMMP1LP1-201ENST00000605170 488 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 COX6CP4-201ENST00000605798 228 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 MIR8069-1-201ENST00000616627 86 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 MIR8069-2-201ENST00000621412 86 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 AC009452.1-201ENST00000640823 606 ntBASIC5.17□□□□□ -1.58
COL2A1P02458 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
COL2A1P02458 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.17□□□□□ -1.58
COL2A1P02458 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL2A1P02458 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL2A1P02458 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
COL2A1P02458 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
COL2A1P02458 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
COL2A1P02458 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.16□□□□□ -1.58
COL2A1P02458 AC097374.1-203ENST00000400783 485 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 CYCSP19-201ENST00000411715 316 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 AC019070.1-201ENST00000415008 1024 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 EIF4A1P1-201ENST00000420241 934 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 OR2AH1P-201ENST00000425717 928 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.16□□□□□ -1.58
COL2A1P02458 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.16□□□□□ -1.58
COL2A1P02458 NPM1P28-201ENST00000492269 840 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.16□□□□□ -1.58
COL2A1P02458 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 RNU1-45P-201ENST00000517191 141 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 RGS5-218ENST00000526176 574 ntTSL 4 BASIC5.16□□□□□ -1.58
COL2A1P02458 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.16□□□□□ -1.58
COL2A1P02458 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.16□□□□□ -1.58
COL2A1P02458 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
COL2A1P02458 AL445363.3-201ENST00000623080 671 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 AC099654.11-201ENST00000638857 294 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 AL022393.1-201ENST00000625142 1677 ntBASIC5.16□□□□□ -1.58
COL2A1P02458 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.16□□□□□ -1.58
COL2A1P02458 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL2A1P02458 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.16□□□□□ -1.58
COL2A1P02458 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.16□□□□□ -1.58
COL2A1P02458 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL2A1P02458 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms