Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AL035419.1-201ENST00000397037 564 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 RNU4-72P-201ENST00000410754 173 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS4BO75351 UBE2D3P1-201ENST00000436669 444 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 ARL5AP2-201ENST00000444698 533 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 EEF1B2P6-201ENST00000445713 673 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AC007327.1-201ENST00000447461 264 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 RPS17P15-201ENST00000475609 349 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC118282.2-201ENST00000508739 374 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC021678.3-201ENST00000517893 476 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC010306.1-201ENST00000523223 1117 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 HMGN2P36-201ENST00000529541 409 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 PDCL2P2-201ENST00000533651 189 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 YWHABP2-201ENST00000540201 713 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC025260.1-201ENST00000548858 430 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 HAUS8P1-201ENST00000549005 542 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4BO75351 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS4BO75351 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 AP002884.5-201ENST00000595053 1132 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AL158042.1-201ENST00000605338 460 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AL583856.2-201ENST00000606298 543 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AP003392.5-201ENST00000607857 415 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4BO75351 AC139769.3-201ENST00000618383 175 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AL603755.1-201ENST00000619504 163 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AP000676.3-201ENST00000623299 569 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
VPS4BO75351 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC007671.2-201ENST00000637344 619 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS4BO75351 AC087565.3-203ENST00000641018 837 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 AP005435.3-201ENST00000531260 3198 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.43□□□□□ -1.54
VPS4BO75351 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS4BO75351 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4BO75351 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS4BO75351 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS4BO75351 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC005261.4-201ENST00000600047 1385 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 CASC19-248ENST00000641674 1356 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS4BO75351 AL022322.2-201ENST00000624072 20397 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS4BO75351 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 AC007996.1-201ENST00000620414 2821 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS4BO75351 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS4BO75351 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS4BO75351 SNORA48.4-201ENST00000391089 134 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 RSL24D1P4-201ENST00000400938 484 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 HMGB1P20-201ENST00000402555 677 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 RPL37P18-201ENST00000411602 243 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 OR6K4P-201ENST00000423179 955 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AP001324.1-201ENST00000428553 399 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS4BO75351 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS4BO75351 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS4BO75351 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS4BO75351 NPM1P13-201ENST00000452663 865 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS4BO75351 AZGP1P2-201ENST00000454506 345 ntBASIC5.42□□□□□ -1.54
VPS4BO75351 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS4BO75351 RN7SL826P-201ENST00000479724 288 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms