Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 AP001317.1-201ENST00000531194 960 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 AL138895.2-201ENST00000603019 178 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC022509.4-201ENST00000621404 572 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 uc_338.7-201ENST00000621834 124 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC112694.2-201ENST00000623697 768 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC009039.2-201ENST00000624524 529 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 AF001550.2-201ENST00000636643 217 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.41□□□□□ -1.54
PHGDHO43175 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PHGDHO43175 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 AC091305.2-201ENST00000624049 1576 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 AC010266.2-201ENST00000564741 3255 ntBASIC5.41□□□□□ -1.54
PHGDHO43175 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.41□□□□□ -1.54
PHGDHO43175 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PHGDHO43175 AC009313.2-201ENST00000417893 1941 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PHGDHO43175 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHGDHO43175 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 AL355852.1-201ENST00000454081 1771 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PHGDHO43175 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHGDHO43175 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PHGDHO43175 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
PHGDHO43175 SNORA51.12-201ENST00000384448 134 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC007435.1-201ENST00000421086 415 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 AL133173.1-201ENST00000423458 397 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC073143.1-201ENST00000436316 395 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC015724.1-201ENST00000478577 156 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC104971.1-201ENST00000495117 578 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 DYNLL1P6-201ENST00000503440 264 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PHGDHO43175 AC109464.1-201ENST00000511091 819 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 RNU6-347P-201ENST00000516658 105 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 CDC42P3-201ENST00000518493 633 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 C1GALT1P3-201ENST00000522049 819 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.4□□□□□ -1.54
PHGDHO43175 OR4C2P-201ENST00000530855 1064 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC010198.2-201ENST00000550612 259 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.4□□□□□ -1.54
PHGDHO43175 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC115085.1-201ENST00000588924 229 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.4□□□□□ -1.54
PHGDHO43175 DPRXP5-201ENST00000604662 539 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 LSM1P2-201ENST00000604911 322 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 AC116563.2-201ENST00000624751 535 ntBASIC5.4□□□□□ -1.54
PHGDHO43175 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.4□□□□□ -1.54
PHGDHO43175 AC092376.2-201ENST00000622621 4116 ntBASIC5.4□□□□□ -1.55
PHGDHO43175 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PHGDHO43175 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PHGDHO43175 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PHGDHO43175 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
PHGDHO43175 YES1P1-201ENST00000418510 1628 ntBASIC5.4□□□□□ -1.55
PHGDHO43175 ASNSP1-204ENST00000641977 1664 ntBASIC5.4□□□□□ -1.55
PHGDHO43175 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PHGDHO43175 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.4□□□□□ -1.55
PHGDHO43175 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.4□□□□□ -1.55
PHGDHO43175 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.39□□□□□ -1.55
PHGDHO43175 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 AC012321.1-201ENST00000561622 1588 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms