Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC011037.1-201ENST00000483964 558 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 COX6B1P2-201ENST00000489624 230 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC034244.1-201ENST00000507687 207 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 COX6B1P5-201ENST00000509843 249 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 RNA5SP34-201ENST00000516887 130 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AP001804.2-201ENST00000533932 910 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 MTCYBP28-201ENST00000566728 1132 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC006116.3-201ENST00000592968 361 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 Z99497.2-201ENST00000603634 310 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC092106.3-201ENST00000611308 722 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AL139407.1-201ENST00000613826 1175 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC015914.2-201ENST00000618167 288 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC010975.3-201ENST00000618727 978 ntBASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TCRBV5S1A1TA0A578 THAP12P5-201ENST00000405864 2275 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC120338.1-201ENST00000625074 1541 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 OR5H2-201ENST00000355273 945 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RNU6-1214P-201ENST00000363650 109 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RNU4-92P-201ENST00000363783 136 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RNA5SP428-201ENST00000365129 132 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 SNORA70.10-201ENST00000384515 134 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RN7SKP229-201ENST00000410465 302 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC013429.2-201ENST00000418798 781 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 MTND4P32-201ENST00000437189 1237 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 EEF1A1P39-201ENST00000440791 250 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 MTND1P29-201ENST00000448112 647 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC005410.1-202ENST00000460347 485 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC108120.2-201ENST00000512973 294 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RFPL4AP3-201ENST00000515267 345 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 SNORA31.13-201ENST00000516624 135 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 MTCYBP19-201ENST00000517463 1124 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC013701.1-201ENST00000522657 465 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 MTCO1P47-201ENST00000523889 1271 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC022832.1-201ENST00000530718 645 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC004825.1-201ENST00000555068 586 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC109446.2-201ENST00000567872 497 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC007349.4-201ENST00000608114 532 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 Z95327.3-201ENST00000610385 572 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AL138478.1-201ENST00000612252 832 ntBASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TCRBV5S1A1TA0A578 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 280.1 ms