Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC006504.1-201ENST00000562493 3666 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 RNA5SP167-201ENST00000365461 116 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 OR13C3-201ENST00000374781 1108 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SNORA37-201ENST00000384504 129 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 MIR124-3-201ENST00000384866 87 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 MT-RNR1-201ENST00000389680 954 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SNORA48.8-201ENST00000391324 134 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL353133.1-201ENST00000407695 401 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 HMGN1P20-201ENST00000411849 300 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 VDAC1P6-201ENST00000430062 855 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 UBE2V2P1-201ENST00000434717 398 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 RAB9AP5-201ENST00000437794 597 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 RAB9AP2-201ENST00000443911 597 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 TCEA1P1-201ENST00000449716 880 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 EIF4A2P4-201ENST00000458691 1196 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 RPS27P29-201ENST00000463110 252 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC006463.2-201ENST00000473326 348 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC079841.1-201ENST00000481228 950 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 IGLV2-34-201ENST00000490007 283 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AP002453.1-201ENST00000492327 668 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC010350.1-201ENST00000504908 231 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 WARSP1-201ENST00000533936 454 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC092747.2-201ENST00000545069 983 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 MTND2P17-201ENST00000550281 688 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 CRADD-211ENST00000552983 839 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC037471.2-201ENST00000564941 598 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 CMC2-213ENST00000565914 528 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 RN7SL664P-201ENST00000584239 305 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL160290.3-201ENST00000604869 165 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL078624.2-201ENST00000605063 554 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC064801.1-201ENST00000612025 407 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC245014.3-201ENST00000618589 347 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 CENPP-204ENST00000618653 570 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC095038.2-201ENST00000621464 1070 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC099494.2-201ENST00000623371 978 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC138649.5-201ENST00000637456 137 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC074101.1-201ENST00000637861 241 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC139769.1-204ENST00000472297 1931 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AC125257.1-201ENST00000560400 2930 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 AL133383.2-201ENST00000622958 2336 ntBASIC2.22□□□□□ -2.05
LINC01558Q9Y6Z2 SRP72P2-201ENST00000344851 1979 ntBASIC2.21□□□□□ -2.05
LINC01558Q9Y6Z2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 SPATA31D2P-201ENST00000429999 4388 ntBASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 AC007496.3-201ENST00000624987 3443 ntBASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 SNORA74A-201ENST00000364089 198 ntBASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 OR1F12-201ENST00000402365 945 ntBASIC2.21□□□□□ -2.06
LINC01558Q9Y6Z2 AL589994.1-201ENST00000404962 340 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms