Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC007738.1-201ENST00000413892 348 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 SETP6-201ENST00000479329 568 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AL592436.1-201ENST00000605135 558 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC008155.2-201ENST00000464337 397 ntBASIC4.41□□□□□ -1.7
CHD7Q9P2D1 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CHD7Q9P2D1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.4□□□□□ -1.7
CHD7Q9P2D1 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.4□□□□□ -1.7
CHD7Q9P2D1 AC245052.5-201ENST00000416320 649 ntBASIC4.4□□□□□ -1.7
CHD7Q9P2D1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 RPS11P1-201ENST00000451072 473 ntBASIC4.4□□□□□ -1.7
CHD7Q9P2D1 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 AP002360.3-201ENST00000607673 710 ntBASIC4.4□□□□□ -1.7
CHD7Q9P2D1 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CHD7Q9P2D1 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 MTND5P1-201ENST00000445440 1375 ntBASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AL591135.1-201ENST00000401578 5914 ntBASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AC006011.1-201ENST00000442758 349 ntBASIC4.4□□□□□ -1.71
CHD7Q9P2D1 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AL358832.1-201ENST00000497800 389 ntBASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AC026427.2-201ENST00000506228 536 ntBASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD7Q9P2D1 SCARNA15-201ENST00000607520 4325 ntBASIC4.4□□□□□ -1.71
CHD7Q9P2D1 AC116667.1-201ENST00000604855 2072 ntBASIC4.4□□□□□ -1.71
CHD7Q9P2D1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 RPL7P4-203ENST00000430239 730 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 MRPL48P1-201ENST00000445390 636 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 AL672167.1-204ENST00000641875 3017 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 AL451050.1-201ENST00000450126 415 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 RNA5SP446-201ENST00000515955 82 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 RN7SKP141-201ENST00000516167 338 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 NDUFA5P2-201ENST00000519723 344 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 AC016957.2-201ENST00000616998 848 ntBASIC4.39□□□□□ -1.71
CHD7Q9P2D1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHD7Q9P2D1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 RPL7P22-201ENST00000466005 733 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AL121890.2-201ENST00000617644 465 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.38□□□□□ -1.71
CHD7Q9P2D1 RPS26P28-201ENST00000470806 348 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 HPRT1P2-201ENST00000505250 544 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 RNU1-95P-201ENST00000516357 160 ntBASIC4.38□□□□□ -1.71
CHD7Q9P2D1 RNU1-128P-201ENST00000516704 160 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms