Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 DYNLL1P4-201ENST00000549314 266 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC018552.3-201ENST00000567416 561 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 MIR4691-201ENST00000583764 85 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC008966.2-201ENST00000606157 453 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 AC092159.4-201ENST00000624944 550 ntBASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCNB1IP1Q9NPC3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CCNB1IP1Q9NPC3 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.34□□□□□ -1.72
CCNB1IP1Q9NPC3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
CCNB1IP1Q9NPC3 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.34□□□□□ -1.72
CCNB1IP1Q9NPC3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CCNB1IP1Q9NPC3 AL136164.3-201ENST00000624429 3978 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL592182.3-201ENST00000642132 3304 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC074029.4-201ENST00000624796 1859 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 ATP5F1P2-201ENST00000398143 760 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL034374.1-201ENST00000406329 351 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 BMS1P13-201ENST00000417301 885 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL627308.1-201ENST00000435693 821 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 CACYBPP1-201ENST00000438592 684 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 RN7SL727P-201ENST00000482164 296 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC004815.1-201ENST00000484185 331 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC008953.1-201ENST00000497334 318 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AC123786.2-201ENST00000603459 275 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL627230.1-201ENST00000613077 211 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL353726.1-201ENST00000614041 1000 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL591926.8-201ENST00000616876 211 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL353662.3-201ENST00000625131 237 ntBASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.33□□□□□ -1.72
CCNB1IP1Q9NPC3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 TLK1P1-201ENST00000456760 2440 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 RPL6P29-201ENST00000414863 865 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 RPL23AP27-201ENST00000415161 451 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 UBTFL3-201ENST00000418934 1024 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 RPL7P57-201ENST00000423238 740 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 PA2G4P6-201ENST00000438325 1197 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC000111.2-201ENST00000448200 210 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 UBTFL6-201ENST00000477929 1024 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC008897.1-201ENST00000494006 347 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC093763.2-201ENST00000505334 1223 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 OR5M14P-201ENST00000506803 618 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC006499.6-201ENST00000511169 607 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 FKBP1BP1-201ENST00000553366 325 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC087763.1-201ENST00000603391 286 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AL590410.1-201ENST00000617925 333 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AL133370.2-201ENST00000619934 439 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 AC091905.4-201ENST00000623432 202 ntBASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.32□□□□□ -1.72
CCNB1IP1Q9NPC3 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCNB1IP1Q9NPC3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CCNB1IP1Q9NPC3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCNB1IP1Q9NPC3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCNB1IP1Q9NPC3 SYT14P1-202ENST00000600441 1448 ntBASIC4.31□□□□□ -1.72
CCNB1IP1Q9NPC3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCNB1IP1Q9NPC3 AC009229.4-201ENST00000623854 1947 ntBASIC4.31□□□□□ -1.72
CCNB1IP1Q9NPC3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms