Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AL672167.3-201ENST00000465951 960 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 MTND6P6-201ENST00000478031 263 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AC005412.2-201ENST00000492004 341 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AC073073.1-201ENST00000493920 463 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 ARL4AP1-201ENST00000503220 705 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AL512310.9-201ENST00000553311 948 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AL049874.4-201ENST00000557593 255 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 HMGB3P26-201ENST00000560051 582 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 BMS1P7-201ENST00000602440 1052 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 AC063976.2-201ENST00000425667 3556 ntBASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TM9SF3Q9HD45 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AL034370.1-201ENST00000397254 1590 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 VN2R3P-201ENST00000422626 1412 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 OR52B1P-201ENST00000316506 909 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AL590240.1-201ENST00000334118 313 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 LRRC37BP1-201ENST00000398851 714 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 U3.32-201ENST00000408116 212 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC114755.2-201ENST00000413520 361 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC013429.2-201ENST00000418798 781 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 RPL36AP10-201ENST00000421785 322 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 CENPIP1-201ENST00000425713 902 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 CNOT7P1-201ENST00000429006 852 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 MTCYBP29-201ENST00000436327 1006 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AL450023.3-201ENST00000440592 271 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 C1DP3-201ENST00000455013 423 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 RPL7AP52-201ENST00000458096 790 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC022795.1-201ENST00000473808 480 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AK3P4-201ENST00000504283 583 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC108471.1-201ENST00000513977 287 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 RNA5SP303-201ENST00000516192 130 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 HMGB1P19-201ENST00000517578 577 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC090515.3-201ENST00000560431 315 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC027281.1-201ENST00000574178 758 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AP000919.1-201ENST00000582850 985 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC117490.2-201ENST00000610042 594 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AC007497.1-201ENST00000610421 561 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 FAM27B-201ENST00000610601 213 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 AL049794.2-201ENST00000616301 365 ntBASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TM9SF3Q9HD45 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TM9SF3Q9HD45 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
TM9SF3Q9HD45 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.84□□□□□ -1.64
TM9SF3Q9HD45 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TM9SF3Q9HD45 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TM9SF3Q9HD45 AP001273.1-201ENST00000624493 3152 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 DHX40P1-201ENST00000588725 1412 ntBASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TM9SF3Q9HD45 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms