Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL109941.1-201ENST00000401925 229 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AL645733.1-201ENST00000402250 217 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 VDAC1P9-201ENST00000412766 841 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 RSU1P3-201ENST00000412878 835 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC073136.2-201ENST00000417282 849 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 BX510359.2-201ENST00000417920 305 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 RPA2P2-201ENST00000419698 796 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC048351.1-201ENST00000420064 602 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC097523.2-201ENST00000435551 652 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 VN1R48P-201ENST00000448149 1036 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 PSMC1P13-201ENST00000458195 985 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC063943.1-201ENST00000465434 453 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC098799.3-201ENST00000506095 438 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC209154.1-201ENST00000582156 337 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC005084.1-201ENST00000605160 304 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 HMGB1P51-201ENST00000605166 638 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AL353600.1-201ENST00000608148 251 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 SDAD1P1-202ENST00000524156 2051 ntBASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LRRC40Q9H9A6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 RNU6-670P-201ENST00000364312 104 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 MIR323B-201ENST00000385269 82 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 Z98745.1-201ENST00000402553 494 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 RN7SKP100-201ENST00000411258 284 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AL358176.3-201ENST00000420757 454 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC004074.1-201ENST00000421810 1063 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 RPL21P43-201ENST00000425440 472 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 MTCO3P21-201ENST00000430791 643 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC016831.4-201ENST00000438302 307 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC092013.1-201ENST00000438795 332 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 ARL5AP3-201ENST00000439327 386 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 RPL31P44-201ENST00000447680 377 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AL645937.3-201ENST00000453647 936 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC022795.1-201ENST00000473808 480 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 ATG10-AS1-201ENST00000504846 648 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC008638.1-201ENST00000506035 866 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 RN7SKP276-201ENST00000516242 268 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC067904.2-201ENST00000517322 1283 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 SOX5P1-201ENST00000524155 1127 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AL110118.1-201ENST00000553543 400 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 RPL21P7-201ENST00000557463 483 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC044860.2-201ENST00000561005 179 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 ATP5J2P6-201ENST00000565203 266 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 RN7SL652P-201ENST00000577769 300 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 HMGB2P1-201ENST00000591146 634 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC068020.1-201ENST00000594215 661 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AL031320.1-201ENST00000604177 357 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC133552.5-201ENST00000604266 540 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC004232.3-201ENST00000622977 525 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC005086.4-201ENST00000623065 213 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AL596275.2-204ENST00000641628 552 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 AL596275.2-206ENST00000641957 626 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 NEAT1-202ENST00000501122 22743 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 Z95327.2-201ENST00000414579 1873 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LRRC40Q9H9A6 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms