Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RNA5SP397-201ENST00000391323 118 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 MIR298-201ENST00000401212 88 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AL049697.2-201ENST00000403708 294 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AL136131.1-201ENST00000406079 803 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 RNU2-50P-201ENST00000410494 143 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC073264.2-201ENST00000448886 166 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 BUD31P2-201ENST00000449374 300 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 CCRL1P1-201ENST00000449542 1053 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC022431.1-201ENST00000450941 438 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 NPM1P29-201ENST00000483112 803 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 DEFB109F-201ENST00000491870 277 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC234771.5-201ENST00000600161 514 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 RMST_5.1-201ENST00000618704 126 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AL133370.2-201ENST00000619934 439 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 OR14L1P-202ENST00000641545 3009 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 MAPK10-303ENST00000641324 3959 ntBASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CCSER1Q9C0I3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC007342.7-201ENST00000624610 2337 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 RNU4-23P-201ENST00000362839 140 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 RNU6-1251P-201ENST00000364502 107 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 SNORA71.2-201ENST00000364941 134 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 OR1F12-201ENST00000402365 945 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 FCF1P5-201ENST00000406490 482 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 CEACAMP8-201ENST00000413902 580 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC019050.1-201ENST00000418508 492 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 NPM1P33-201ENST00000438918 872 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC011753.3-201ENST00000443436 406 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC010326.1-201ENST00000462726 602 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC108022.1-201ENST00000493466 478 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 OR8X1P-201ENST00000534542 869 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC090181.2-201ENST00000602975 672 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 BPIFA4P-203ENST00000603168 689 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AL133338.2-201ENST00000604292 736 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AP002360.3-201ENST00000607673 710 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 MIR7703-201ENST00000620784 77 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 CPHL1P-201ENST00000461341 3407 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 LINC00622-201ENST00000562811 1570 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 AC108467.2-201ENST00000617640 1597 ntBASIC5.12□□□□□ -1.59
CCSER1Q9C0I3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AC000123.3-201ENST00000624029 4975 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 RNU1-20P-201ENST00000363314 162 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 SNORA70F-201ENST00000384142 135 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 AL139039.2-201ENST00000407436 479 ntBASIC5.11□□□□□ -1.59
CCSER1Q9C0I3 RPA2P2-201ENST00000419698 796 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms