Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TRIM55Q9BYV6 AC092104.1-201ENST00000497346 1441 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 QRSL1P1-201ENST00000400977 1540 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC019072.1-201ENST00000604535 1551 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 RNU4-21P-201ENST00000362802 126 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 RNU4-75P-201ENST00000364621 146 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 Y_RNA.553-201ENST00000384670 102 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 Y_RNA.559-201ENST00000384686 107 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MIR188-201ENST00000385034 86 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AL450338.1-201ENST00000407987 512 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC009965.2-201ENST00000425328 970 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 USP24P1-201ENST00000433802 779 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 USP9YP28-201ENST00000435142 589 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 RPS3AP38-201ENST00000435889 763 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 KRT8P51-201ENST00000438938 274 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MTND2P20-201ENST00000440805 661 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC023271.1-201ENST00000445936 1090 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 SLC31A1P1-201ENST00000451221 567 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ZNF114P1-201ENST00000453500 292 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC079841.1-201ENST00000481228 950 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 HMGN2P25-201ENST00000486956 268 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC060788.1-201ENST00000521318 469 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC136777.2-201ENST00000522979 358 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 TRIM51DP-201ENST00000529746 596 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AP004609.2-201ENST00000532177 190 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 SYPL1P2-201ENST00000582878 727 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC027229.1-201ENST00000583887 253 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC020914.6-201ENST00000594327 272 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC025857.2-201ENST00000602711 238 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MTCYBP22-201ENST00000603788 447 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC092354.1-201ENST00000606057 376 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MIR7844-201ENST00000616161 122 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MIR6085-201ENST00000618314 110 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC092656.1-203ENST00000624134 423 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC123769.1-201ENST00000530992 3192 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 AC090017.1-201ENST00000548612 1779 ntBASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.16□□□□□ -1.42
TRIM55Q9BYV6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 Y_RNA.302-201ENST00000364997 102 ntBASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 RNU1-74P-201ENST00000384108 171 ntBASIC6.15□□□□□ -1.42
TRIM55Q9BYV6 RNU6-1122P-201ENST00000384449 107 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms