Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.97□□□□□ -1.29
USB1Q9BQ65 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USB1Q9BQ65 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
USB1Q9BQ65 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.29
USB1Q9BQ65 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
USB1Q9BQ65 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 YAF2-201ENST00000327791 4156 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC6.96□□□□□ -1.29
USB1Q9BQ65 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 AC011416.1-201ENST00000514947 1732 ntBASIC6.96□□□□□ -1.29
USB1Q9BQ65 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
USB1Q9BQ65 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
USB1Q9BQ65 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.29
USB1Q9BQ65 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 RNU1-85P-201ENST00000364127 164 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 RNY3P13-201ENST00000365542 102 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 Y_RNA.389-201ENST00000383924 113 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 Y_RNA.645-201ENST00000391229 102 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 RPL23A-203ENST00000394938 688 ntTSL 2 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL078604.1-201ENST00000404609 466 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC017035.1-201ENST00000411999 1115 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL591848.1-201ENST00000413092 322 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC068533.1-201ENST00000418542 415 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC003989.1-201ENST00000434569 565 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC009269.1-202ENST00000484381 469 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC116562.3-201ENST00000506136 177 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC096754.1-201ENST00000508904 818 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 Y_RNA.721-201ENST00000517207 102 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC068587.5-201ENST00000528506 175 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AP000889.1-201ENST00000530968 660 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC026111.1-201ENST00000551090 1195 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC124068.1-201ENST00000563131 678 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 RPL23AP77-201ENST00000588044 463 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC023043.2-201ENST00000589678 1026 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL451085.1-201ENST00000604546 690 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL122023.1-201ENST00000622847 530 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL158163.1-201ENST00000603915 1649 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 MAPK10-347ENST00000641762 2856 ntBASIC6.96□□□□□ -1.3
USB1Q9BQ65 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
USB1Q9BQ65 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
USB1Q9BQ65 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 MRE11P1-201ENST00000464884 2127 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 MEF2C-232ENST00000629612 2851 ntTSL 5 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 SPRY1-202ENST00000394339 2504 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.95□□□□□ -1.3
USB1Q9BQ65 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 OR51A10P-201ENST00000307165 937 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 RNU6-28P-201ENST00000362378 107 ntBASIC6.95□□□□□ -1.3
USB1Q9BQ65 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
USB1Q9BQ65 Y_RNA.512-201ENST00000384518 102 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms