Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC068870.3-201ENST00000625077 2536 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AL121886.1-201ENST00000358609 435 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 Y_RNA.248-201ENST00000364501 109 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 ATF1P1-201ENST00000406040 927 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 RANP4-201ENST00000413361 655 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 NPM1P11-201ENST00000417106 855 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 GLUD1P9-201ENST00000420997 1173 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 DPRXP1-201ENST00000426312 460 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 OR6D1P-201ENST00000436165 939 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AL096803.2-201ENST00000450032 677 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC234781.3-201ENST00000452540 973 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC093890.1-201ENST00000502554 540 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC093281.2-201ENST00000510153 597 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC109464.2-201ENST00000510242 943 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC137627.1-201ENST00000545761 289 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC008126.1-201ENST00000549019 480 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC025918.2-201ENST00000558683 763 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC087481.2-201ENST00000565492 330 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 SNORA59B-202ENST00000578183 701 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC090616.2-202ENST00000584248 222 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 VN1R90P-201ENST00000595717 726 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 VN1R92P-201ENST00000598511 928 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC106791.2-201ENST00000604680 391 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AP001330.5-201ENST00000607176 411 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AP000894.4-201ENST00000610185 483 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC022467.1-201ENST00000614738 749 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR6886-201ENST00000619864 61 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 AP000473.2-201ENST00000602659 1537 ntBASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 OR4F13P-202ENST00000560066 2054 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR133A2-201ENST00000347538 102 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 MTCO2P34-201ENST00000421994 607 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC012519.1-201ENST00000424588 610 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 CENPIP1-201ENST00000425713 902 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AL390119.1-201ENST00000440329 312 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC090602.1-201ENST00000469695 252 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 SIAH1P1-201ENST00000479411 923 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 RPL21P47-201ENST00000483696 477 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 RPL9P33-201ENST00000484311 566 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 TPT1P3-201ENST00000492841 512 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 OR5H4P-201ENST00000510851 923 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 RNU6-1178P-201ENST00000516674 107 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 Y_RNA.695-201ENST00000516715 107 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 RN7SKP99-201ENST00000517028 307 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 IGKV2-18-201ENST00000522607 343 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 OR8I1P-201ENST00000529291 931 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 AC016957.1-201ENST00000534895 309 ntBASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
CDK5RAP1Q96SZ6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms