Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 MTND4LP20-201ENST00000402379 270 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AC115285.1-201ENST00000424879 736 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 RPL12P46-201ENST00000436610 195 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 BX510359.1-201ENST00000456973 237 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AP001486.1-201ENST00000463339 476 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 AC020893.1-201ENST00000502452 580 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 CR392039.4-201ENST00000624968 501 ntBASIC3.61□□□□□ -1.83
CSMD1Q96PZ7 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 FTX-215ENST00000638681 9771 ntTSL 5 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 OR11H4-201ENST00000315409 1082 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 RHEBP2-201ENST00000450289 600 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 MYL12BP2-201ENST00000503948 512 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AC099522.1-202ENST00000514718 367 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AL606490.9-201ENST00000603331 271 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 MIR6715A-201ENST00000615929 79 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 THAP12P5-201ENST00000405864 2275 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AL355488.2-201ENST00000609909 2850 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AL451139.1-201ENST00000434718 346 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 AL021997.2-201ENST00000615674 271 ntBASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CSMD1Q96PZ7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 RN7SKP167-201ENST00000411047 285 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 BTF3P6-201ENST00000448054 499 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AK4P6-201ENST00000505168 528 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 ADAD1P2-201ENST00000588476 646 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 PRDX3P3-201ENST00000447765 522 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 MIR4325-201ENST00000583049 90 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AL603750.1-201ENST00000624216 1717 ntBASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSMD1Q96PZ7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 AL451050.1-201ENST00000450126 415 ntBASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 RPS20P4-201ENST00000461659 355 ntBASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.59□□□□□ -1.84
CSMD1Q96PZ7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms