Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MTCYBP14-201ENST00000457471 715 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 AC006967.1-201ENST00000467608 589 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AP000926.3-201ENST00000497201 299 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 AC113398.2-201ENST00000507630 558 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 RNU2-30P-201ENST00000516209 141 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AL110118.1-201ENST00000553543 400 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 RN7SL652P-201ENST00000577769 300 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 MIR4270-201ENST00000581799 70 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AC209154.1-201ENST00000582156 337 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AC098935.2-201ENST00000604222 466 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 SNX18P1Y-201ENST00000616231 511 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 LINC00901.1-201ENST00000617252 152 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
COL21A1Q96P44 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL21A1Q96P44 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL21A1Q96P44 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL21A1Q96P44 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL21A1Q96P44 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.34□□□□□ -1.71
COL21A1Q96P44 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL21A1Q96P44 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
COL21A1Q96P44 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
COL21A1Q96P44 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL21A1Q96P44 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL21A1Q96P44 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL21A1Q96P44 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL21A1Q96P44 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL21A1Q96P44 Z98745.1-201ENST00000402553 494 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 OR6C71P-201ENST00000432580 913 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 RPS26P28-201ENST00000470806 348 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 OR9N1P-201ENST00000491296 333 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 SNORD116-30-201ENST00000516468 85 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 CDH12P4-201ENST00000517835 295 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 CDH12P3-201ENST00000517935 295 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 CDH12P1-201ENST00000518435 295 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 DYNLL1P4-201ENST00000549314 266 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 MTND6P33-201ENST00000571794 183 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 AC027455.1-201ENST00000574104 594 ntBASIC4.33□□□□□ -1.72
COL21A1Q96P44 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL21A1Q96P44 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.33□□□□□ -1.72
COL21A1Q96P44 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL590240.1-201ENST00000334118 313 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 RNU6-1263P-201ENST00000384601 106 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL121834.1-202ENST00000404494 277 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC140479.3-201ENST00000418944 1126 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 RPL21P43-201ENST00000425440 472 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC097523.2-201ENST00000435551 652 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 HMGB3P9-201ENST00000441799 583 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 OR6C72P-201ENST00000451403 892 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 MTND6P32-201ENST00000457611 483 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC012158.1-204ENST00000483430 465 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC100770.1-201ENST00000532310 322 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 AL121834.1-201ENST00000572284 509 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 AP005901.4-201ENST00000577336 569 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 MTND2P13-201ENST00000577438 1039 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 HMGB2P1-201ENST00000591146 634 ntBASIC4.32□□□□□ -1.72
COL21A1Q96P44 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.32□□□□□ -1.72
COL21A1Q96P44 RPL7P50-201ENST00000600588 727 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms