Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC021146.4-201ENST00000309229 279 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 MIR298-201ENST00000401212 88 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AL031584.1-201ENST00000447169 754 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 RNA5SP73-201ENST00000516744 108 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 IGKV2-23-201ENST00000518729 323 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 CYCSP28-201ENST00000534284 321 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AP001160.4-201ENST00000596971 382 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AL049840.6-202ENST00000603373 279 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC010201.1-201ENST00000605051 540 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 Z98200.1-201ENST00000607298 470 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC243756.2-201ENST00000618406 463 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 OR51H2P-202ENST00000641424 3046 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC023632.6-201ENST00000624338 2177 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC125336.1-201ENST00000508893 2827 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 RNU4-39P-201ENST00000362455 127 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 RPS3AP25-201ENST00000411660 793 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 RPS12P10-201ENST00000427031 377 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AL935212.3-201ENST00000450729 284 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC023632.4-201ENST00000517783 191 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 HMGB2P1-201ENST00000591146 634 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 FP325313.1-201ENST00000638228 703 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 NXPH1-205ENST00000602349 1953 ntBASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM3Q8TF72 AC022893.2-201ENST00000564832 3296 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AC120338.1-201ENST00000625074 1541 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 FCF1P5-201ENST00000406490 482 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AL356095.1-201ENST00000417217 199 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 RAD23BP1-201ENST00000421404 1227 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 OR4C10P-201ENST00000434991 931 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 MTND4LP2-201ENST00000502312 285 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AC026782.2-201ENST00000510845 636 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AC004777.1-201ENST00000624317 287 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AL022311.1-201ENST00000623726 19416 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 AC093591.2-201ENST00000565254 3843 ntBASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM3Q8TF72 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 SNORA70C-201ENST00000384538 135 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 UBTFL3-201ENST00000418934 1024 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC012671.1-201ENST00000451912 203 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 UBTFL6-201ENST00000477929 1024 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC026726.1-201ENST00000512859 601 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 IGLVIV-65-201ENST00000517313 360 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC007546.2-201ENST00000623996 360 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 AC005261.4-201ENST00000600047 1385 ntBASIC4.56□□□□□ -1.68
SHROOM3Q8TF72 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms