Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 RNFT1P2-201ENST00000443064 757 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 EEF1B2P5-201ENST00000444820 548 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 RN7SL799P-201ENST00000475891 298 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 RN7SL727P-201ENST00000482164 296 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC104629.1-201ENST00000494226 508 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 HMGN1P15-201ENST00000513870 295 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC011447.4-201ENST00000587562 111 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 ZNF92P3-201ENST00000596594 954 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC079880.2-201ENST00000603790 1213 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 HSPA8P18-201ENST00000439846 1928 ntBASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NUP54Q7Z3B4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AL450345.1-202ENST00000605741 3881 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 RPL23P2-201ENST00000320371 421 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 RNU6-252P-201ENST00000363232 107 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 RPL12P9-201ENST00000412942 488 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 RPL30P3-201ENST00000424262 333 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 MTCYBP21-201ENST00000443300 1113 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 RPL31P44-201ENST00000447680 377 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC008638.1-201ENST00000506035 866 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 NDUFB4P12-201ENST00000513465 390 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC100784.1-201ENST00000522790 310 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 UBTFL9-201ENST00000534504 1148 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 OR7E18P-201ENST00000592589 702 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AC005034.4-201ENST00000603612 899 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 SDR42E1P1-201ENST00000611327 477 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 AL592494.2-201ENST00000425455 1548 ntBASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NUP54Q7Z3B4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 MTCO1P4-201ENST00000520516 1409 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AC017079.1-201ENST00000333650 415 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 RN7SKP273-201ENST00000411392 314 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 XKRYP4-201ENST00000414395 483 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 LINC01881-201ENST00000416103 412 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.75□□□□□ -1.65
NUP54Q7Z3B4 SDR42E1P3-201ENST00000438345 502 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms