Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 SNORA73.1-201ENST00000363107 205 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 RNA5SP241-201ENST00000391326 114 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AL732292.1-201ENST00000426692 226 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC000111.2-201ENST00000448200 210 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 NUTF2P7-201ENST00000453086 375 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 MTND2P6-201ENST00000455337 1030 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC108751.3-201ENST00000461814 1020 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC073358.1-201ENST00000505671 684 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 RNU1-6P-201ENST00000516290 144 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AL049839.1-201ENST00000556151 657 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC023158.1-201ENST00000561632 1025 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 MTND4LP25-201ENST00000570218 163 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC023575.1-201ENST00000580510 358 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC069061.3-201ENST00000582254 823 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 KPNA2P3-201ENST00000584190 848 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC005191.1-201ENST00000603950 358 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC108359.1-201ENST00000616451 1211 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 OR56B2P-202ENST00000641377 2453 ntBASIC4.78□□□□□ -1.64
LYSMD4Q5XG99 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL442639.1-201ENST00000625030 1899 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC093671.1-201ENST00000624981 2929 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 Z95331.1-201ENST00000623075 23112 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC008758.3-201ENST00000507003 1829 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC007618.1-201ENST00000366455 732 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 RNA5SP345-201ENST00000410646 108 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 RN7SKP27-201ENST00000410684 333 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 UQCRBP1-201ENST00000421129 336 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC012519.1-201ENST00000424588 610 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 RPEP3-201ENST00000425462 676 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 MTND2P2-201ENST00000434633 945 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 MED28P3-201ENST00000444288 531 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC022431.1-201ENST00000450941 438 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC109327.1-201ENST00000471666 403 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 RN7SKP21-201ENST00000516503 220 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC138701.1-201ENST00000524329 714 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 NPM1P35-201ENST00000533043 868 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC021483.2-201ENST00000567415 758 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 RN7SL802P-201ENST00000577858 299 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 RN7SL290P-201ENST00000578661 300 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL121932.1-201ENST00000605542 214 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 MIR6716-201ENST00000613413 80 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AL645927.2-201ENST00000618350 349 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC145207.9-201ENST00000623802 325 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AC007382.1-201ENST00000624376 2618 ntBASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
LYSMD4Q5XG99 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms