Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 LINC00622-201ENST00000562811 1570 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AL161729.3-201ENST00000603533 673 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AL034408.1-202ENST00000636088 415 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 NANOGP10-201ENST00000453325 895 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 DHFRP3-201ENST00000455595 559 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AL133244.1-201ENST00000456007 258 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AC092354.2-201ENST00000607786 514 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 AC090912.3-201ENST00000609775 533 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 MIR6133-201ENST00000617057 108 ntBASIC4.31□□□□□ -1.72
RIF1Q5UIP0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RIF1Q5UIP0 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 MUC2-202ENST00000613187 4845 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC104306.1-201ENST00000449702 371 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 IFITM8P-201ENST00000522529 394 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC105233.3-201ENST00000531125 744 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC022884.2-201ENST00000578535 580 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 MIR5685-201ENST00000579080 79 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 FAM27D1-201ENST00000612308 341 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 MARK2P15-201ENST00000432204 2186 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 OR4A15-201ENST00000314706 1035 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC074250.1-201ENST00000511117 192 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
RIF1Q5UIP0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 MIR1289-1-201ENST00000408836 144 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 CTSL3P-202ENST00000412179 788 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 CDH12P2-201ENST00000504393 298 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 NPM1P21-201ENST00000513394 762 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC018695.5-201ENST00000605872 315 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 AC023632.6-201ENST00000624338 2177 ntBASIC4.29□□□□□ -1.72
RIF1Q5UIP0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.29□□□□□ -1.72
RIF1Q5UIP0 OR51H2P-202ENST00000641424 3046 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms