Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RFX4Q33E94 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX4Q33E94 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.26□□□□□ -1.73
RFX4Q33E94 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RFX4Q33E94 Y_RNA.62-201ENST00000362840 99 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 SNORA74A-201ENST00000364089 198 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 U3.30-201ENST00000391308 210 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 RN7SKP229-201ENST00000410465 302 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 RN7SKP167-201ENST00000411047 285 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC098592.2-201ENST00000413158 265 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 GTF3AP1-201ENST00000416942 1004 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC009302.1-201ENST00000417147 390 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC004552.1-201ENST00000419089 348 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 BX119904.1-201ENST00000432026 348 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 HLA-N-201ENST00000437516 135 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC092647.3-201ENST00000443044 633 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 EEF1B2P5-201ENST00000444820 548 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.25□□□□□ -1.73
RFX4Q33E94 FGF7P3-201ENST00000454645 303 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 RPS26P3-201ENST00000470205 348 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC090543.2-201ENST00000483963 348 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC004057.1-201ENST00000485827 348 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 UBA52P3-201ENST00000491303 382 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 RPL37AP8-201ENST00000494116 276 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.25□□□□□ -1.73
RFX4Q33E94 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC013701.1-201ENST00000522657 465 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RFX4Q33E94 BNIP3P32-201ENST00000600015 554 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC073137.1-201ENST00000605636 634 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC107905.1-201ENST00000616204 426 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.25□□□□□ -1.73
RFX4Q33E94 AC006971.1-201ENST00000407916 4486 ntBASIC4.25□□□□□ -1.73
RFX4Q33E94 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RFX4Q33E94 NCLP2-201ENST00000416078 1462 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX4Q33E94 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.24□□□□□ -1.73
RFX4Q33E94 AC135352.1-201ENST00000506173 1418 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RFX4Q33E94 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RFX4Q33E94 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RFX4Q33E94 RN7SKP95-201ENST00000362860 303 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 RN7SKP269-201ENST00000365545 319 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 RNU1-82P-201ENST00000390851 165 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 CHEK2P3-201ENST00000416118 248 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC093162.1-201ENST00000419682 124 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 MTCO1P51-201ENST00000427672 1060 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.24□□□□□ -1.73
RFX4Q33E94 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.24□□□□□ -1.73
RFX4Q33E94 AC073850.1-201ENST00000449243 255 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 MYO5BP2-201ENST00000449815 1277 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC022431.1-201ENST00000450941 438 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 VN1R32P-201ENST00000452234 905 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.24□□□□□ -1.73
RFX4Q33E94 RPS5P7-201ENST00000456664 608 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 RN7SL727P-201ENST00000482164 296 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC008953.1-201ENST00000497334 318 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 GAPDHP56-201ENST00000506031 988 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC091868.1-201ENST00000508746 304 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC147055.1-201ENST00000509261 750 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.24□□□□□ -1.73
RFX4Q33E94 IGLV2-28-201ENST00000520681 304 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 MORF4L1P3-201ENST00000525966 950 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.24□□□□□ -1.73
RFX4Q33E94 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.24□□□□□ -1.73
RFX4Q33E94 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.24□□□□□ -1.73
RFX4Q33E94 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.24□□□□□ -1.73
RFX4Q33E94 AC124068.1-201ENST00000563131 678 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AC010201.1-201ENST00000605051 540 ntBASIC4.24□□□□□ -1.73
RFX4Q33E94 AL031666.3-201ENST00000609320 1006 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms