Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.28□□□□□ -1.56
GABPAQ06546 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
GABPAQ06546 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.28□□□□□ -1.56
GABPAQ06546 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.28□□□□□ -1.56
GABPAQ06546 AC009852.2-201ENST00000567898 485 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.28□□□□□ -1.56
GABPAQ06546 MIR3939-201ENST00000582614 106 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.28□□□□□ -1.56
GABPAQ06546 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.28□□□□□ -1.56
GABPAQ06546 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.28□□□□□ -1.56
GABPAQ06546 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
GABPAQ06546 AL445567.2-201ENST00000618935 498 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 AC073869.7-201ENST00000640874 297 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 EIF2AP4-201ENST00000424793 1781 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 AC090017.1-201ENST00000548612 1779 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.28□□□□□ -1.56
GABPAQ06546 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 AL603750.1-201ENST00000624216 1717 ntBASIC5.28□□□□□ -1.56
GABPAQ06546 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
GABPAQ06546 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.28□□□□□ -1.56
GABPAQ06546 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.28□□□□□ -1.56
GABPAQ06546 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GABPAQ06546 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GABPAQ06546 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 AL356317.1-201ENST00000396110 1436 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 AL356967.1-201ENST00000406305 431 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 RPS20P25-201ENST00000412447 352 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 OR2AH1P-201ENST00000425717 928 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.27□□□□□ -1.57
GABPAQ06546 AC004975.1-201ENST00000428733 208 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 NPM1P33-201ENST00000438918 872 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
GABPAQ06546 AC012671.1-201ENST00000451912 203 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 OR11I1P-201ENST00000486033 954 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.27□□□□□ -1.57
GABPAQ06546 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.27□□□□□ -1.57
GABPAQ06546 RN7SKP21-201ENST00000516503 220 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 NPM1P52-201ENST00000518264 846 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.27□□□□□ -1.57
GABPAQ06546 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
GABPAQ06546 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.27□□□□□ -1.57
GABPAQ06546 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.27□□□□□ -1.57
GABPAQ06546 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.27□□□□□ -1.57
GABPAQ06546 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GABPAQ06546 RNU6-84P-201ENST00000607737 102 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 AP000843.1-201ENST00000624880 701 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.27□□□□□ -1.57
GABPAQ06546 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
GABPAQ06546 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GABPAQ06546 AP000756.2-201ENST00000624168 2567 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 TCP11X1-202ENST00000622971 1372 ntBASIC5.27□□□□□ -1.57
GABPAQ06546 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
GABPAQ06546 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
GABPAQ06546 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.26□□□□□ -1.57
GABPAQ06546 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
GABPAQ06546 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
GABPAQ06546 RNU6-386P-201ENST00000362650 107 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 AL445213.1-201ENST00000412589 747 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.26□□□□□ -1.57
GABPAQ06546 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 RPS26P4-201ENST00000431743 355 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 RAB9AP5-201ENST00000437794 597 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 RAB9AP2-201ENST00000443911 597 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 AC069304.1-201ENST00000491593 704 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 AC091167.1-201ENST00000492017 396 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.26□□□□□ -1.57
GABPAQ06546 RNA5SP446-201ENST00000515955 82 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.26□□□□□ -1.57
GABPAQ06546 CYCSP29-201ENST00000533731 318 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 PSMB7P1-201ENST00000556349 514 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 MIR4675-201ENST00000577898 77 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.26□□□□□ -1.57
GABPAQ06546 AC079587.1-201ENST00000603846 277 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 QTRT1P1-201ENST00000604344 1078 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 IMMP1LP1-201ENST00000605170 488 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.26□□□□□ -1.57
GABPAQ06546 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.26□□□□□ -1.57
GABPAQ06546 AC010266.2-201ENST00000564741 3255 ntBASIC5.26□□□□□ -1.57
GABPAQ06546 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GABPAQ06546 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
GABPAQ06546 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GABPAQ06546 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
GABPAQ06546 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GABPAQ06546 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
GABPAQ06546 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms