Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
UBA52P62987 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 AC012020.1-201ENST00000624541 1728 ntBASIC3.99□□□□□ -1.77
UBA52P62987 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 A2MP1-204ENST00000566278 4130 ntBASIC3.99□□□□□ -1.77
UBA52P62987 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UBA52P62987 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UBA52P62987 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.99□□□□□ -1.77
UBA52P62987 BX119904.1-201ENST00000432026 348 ntBASIC3.99□□□□□ -1.77
UBA52P62987 HMGB3P9-201ENST00000441799 583 ntBASIC3.99□□□□□ -1.77
UBA52P62987 RPL36AP15-201ENST00000444514 266 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC009963.2-201ENST00000453431 138 ntBASIC3.99□□□□□ -1.77
UBA52P62987 RPS23P7-201ENST00000466210 444 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC3.99□□□□□ -1.77
UBA52P62987 AC111000.3-201ENST00000508057 576 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.99□□□□□ -1.77
UBA52P62987 AC006499.6-201ENST00000511169 607 ntBASIC3.99□□□□□ -1.77
UBA52P62987 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.99□□□□□ -1.77
UBA52P62987 AF186190.1-201ENST00000517470 480 ntBASIC3.99□□□□□ -1.77
UBA52P62987 IGLV3-26-201ENST00000520756 302 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.99□□□□□ -1.77
UBA52P62987 MORF4L1P3-201ENST00000525966 950 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.99□□□□□ -1.77
UBA52P62987 TOMM20P2-201ENST00000540082 421 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.99□□□□□ -1.77
UBA52P62987 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.99□□□□□ -1.77
UBA52P62987 SS18L2P2-201ENST00000583960 235 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC068790.7-201ENST00000602347 528 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC005520.3-201ENST00000602874 370 ntBASIC3.99□□□□□ -1.77
UBA52P62987 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.99□□□□□ -1.77
UBA52P62987 AC005377.1-201ENST00000605126 456 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AL121873.1-201ENST00000616013 524 ntBASIC3.99□□□□□ -1.77
UBA52P62987 AC131238.1-201ENST00000617135 328 ntBASIC3.99□□□□□ -1.77
UBA52P62987 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UBA52P62987 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.99□□□□□ -1.77
UBA52P62987 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.99□□□□□ -1.77
UBA52P62987 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
UBA52P62987 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
UBA52P62987 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UBA52P62987 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
UBA52P62987 AC018529.3-201ENST00000624212 2254 ntBASIC3.98□□□□□ -1.77
UBA52P62987 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
UBA52P62987 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
UBA52P62987 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.98□□□□□ -1.77
UBA52P62987 SNORA70.2-201ENST00000364506 135 ntBASIC3.98□□□□□ -1.77
UBA52P62987 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
UBA52P62987 AL136116.2-201ENST00000404020 785 ntBASIC3.98□□□□□ -1.77
UBA52P62987 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 CNOT7P1-201ENST00000429006 852 ntBASIC3.98□□□□□ -1.77
UBA52P62987 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.98□□□□□ -1.77
UBA52P62987 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.98□□□□□ -1.77
UBA52P62987 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 AC010326.1-201ENST00000462726 602 ntBASIC3.98□□□□□ -1.77
UBA52P62987 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 OR9N1P-201ENST00000491296 333 ntBASIC3.98□□□□□ -1.77
UBA52P62987 IGBP1P5-201ENST00000507524 1000 ntBASIC3.98□□□□□ -1.77
UBA52P62987 RN7SKP276-201ENST00000516242 268 ntBASIC3.98□□□□□ -1.77
UBA52P62987 IFITM8P-201ENST00000522529 394 ntBASIC3.98□□□□□ -1.77
UBA52P62987 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 AC009643.1-201ENST00000532030 391 ntBASIC3.98□□□□□ -1.77
UBA52P62987 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.98□□□□□ -1.77
UBA52P62987 AP001880.2-201ENST00000538233 448 ntBASIC3.98□□□□□ -1.77
UBA52P62987 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.98□□□□□ -1.77
UBA52P62987 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.98□□□□□ -1.77
UBA52P62987 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 AC068790.5-201ENST00000602741 355 ntBASIC3.98□□□□□ -1.77
UBA52P62987 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 AC006840.1-201ENST00000623069 542 ntBASIC3.98□□□□□ -1.77
UBA52P62987 AC016717.3-201ENST00000624730 554 ntBASIC3.98□□□□□ -1.77
UBA52P62987 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.98□□□□□ -1.77
UBA52P62987 AC006453.5-201ENST00000636451 619 ntBASIC3.98□□□□□ -1.77
UBA52P62987 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.98□□□□□ -1.77
UBA52P62987 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
UBA52P62987 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
UBA52P62987 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
UBA52P62987 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
UBA52P62987 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
UBA52P62987 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
UBA52P62987 RNA5SP513-201ENST00000364648 118 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms