Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.32□□□□□ -1.88
CKS1BP61024 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC3.32□□□□□ -1.88
CKS1BP61024 AC007423.1-201ENST00000605009 627 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.32□□□□□ -1.88
CKS1BP61024 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.32□□□□□ -1.88
CKS1BP61024 AC005840.5-201ENST00000619166 599 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AC243960.7-201ENST00000623532 707 ntBASIC3.32□□□□□ -1.88
CKS1BP61024 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC3.32□□□□□ -1.88
CKS1BP61024 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CKS1BP61024 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CKS1BP61024 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CKS1BP61024 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.31□□□□□ -1.88
CKS1BP61024 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.31□□□□□ -1.88
CKS1BP61024 RNU6-304P-201ENST00000364855 107 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC009804.1-201ENST00000400949 179 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 RN7SKP56-201ENST00000410513 331 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 VDAC1P9-201ENST00000412766 841 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC119751.6-201ENST00000416712 186 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 IPPKP1-201ENST00000422501 768 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 RPS27P18-201ENST00000431701 247 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 ELOCP18-201ENST00000434209 337 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC012075.1-201ENST00000436549 580 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC096741.1-201ENST00000472250 846 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 RN7SL481P-201ENST00000477764 299 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 RN7SL547P-201ENST00000490793 290 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 RPL37P23-201ENST00000492641 294 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 RN7SL558P-201ENST00000497468 299 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 RN7SL466P-201ENST00000497546 295 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AK6-203ENST00000502819 743 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC010350.1-201ENST00000504908 231 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CKS1BP61024 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 IGKV2-23-201ENST00000518729 323 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC100770.1-201ENST00000532310 322 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 NANOGNBP2-201ENST00000544753 553 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 NMNAT1P1-201ENST00000554095 876 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AL360157.1-201ENST00000565962 87 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.31□□□□□ -1.88
CKS1BP61024 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC3.31□□□□□ -1.88
CKS1BP61024 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AL499605.1-201ENST00000604628 403 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC233309.1-201ENST00000619522 751 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 AC020978.9-201ENST00000624380 1141 ntBASIC3.31□□□□□ -1.88
CKS1BP61024 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CKS1BP61024 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CKS1BP61024 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.3□□□□□ -1.88
CKS1BP61024 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 TNPO1P3-201ENST00000436471 2662 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 SYT14P1-202ENST00000600441 1448 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CKS1BP61024 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CKS1BP61024 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CKS1BP61024 U1.1-201ENST00000384101 164 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 SNORA66-201ENST00000384792 133 ntBASIC3.3□□□□□ -1.88
CKS1BP61024 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.3□□□□□ -1.88
CKS1BP61024 Z97832.1-201ENST00000402490 328 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms