Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC010678.1-201ENST00000614118 713 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.23□□□□□ -1.57
CLRN1P58418 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 AL136228.1-201ENST00000622221 319 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 MTND4P34-201ENST00000572715 1371 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.23□□□□□ -1.57
CLRN1P58418 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.23□□□□□ -1.57
CLRN1P58418 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
CLRN1P58418 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
CLRN1P58418 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLRN1P58418 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CLRN1P58418 KYNUP3-201ENST00000574386 1341 ntBASIC5.23□□□□□ -1.57
CLRN1P58418 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 AP004607.3-201ENST00000530354 3915 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLRN1P58418 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLRN1P58418 Y_RNA.18-201ENST00000362461 102 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 Y_RNA.359-201ENST00000365498 102 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 RPL11P3-201ENST00000395256 523 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 DEFB108C-201ENST00000400154 252 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 RPL35AP3-201ENST00000414680 288 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 AL590399.2-201ENST00000427536 309 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC022022.1-201ENST00000430304 178 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 PCBP2P1-201ENST00000437262 977 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AMYP1-201ENST00000440059 1023 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 CDC27P1-201ENST00000445384 715 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 RPL36AP33-201ENST00000450395 310 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 ZNF114P1-201ENST00000453500 292 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 snoU13.29-201ENST00000459370 104 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC096741.1-201ENST00000472250 846 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC113430.1-201ENST00000506872 718 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC109458.1-201ENST00000508858 316 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC093281.2-201ENST00000510153 597 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 IMPA1P1-201ENST00000510718 842 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 IGKV3D-25-201ENST00000519599 235 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC078899.1-201ENST00000521432 1185 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLRN1P58418 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC007956.1-201ENST00000555623 542 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC026826.3-201ENST00000561747 158 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.22□□□□□ -1.57
CLRN1P58418 MIR4776-2-201ENST00000580204 80 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 MIR4433B-201ENST00000581329 102 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC008507.1-201ENST00000587506 734 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.22□□□□□ -1.57
CLRN1P58418 AC006115.2-201ENST00000596823 202 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC090181.2-201ENST00000602975 672 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 MTCYBP22-201ENST00000603788 447 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC145423.1-201ENST00000605712 336 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AC092354.1-201ENST00000606057 376 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AL133481.2-203ENST00000607558 139 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 AL136131.3-201ENST00000607600 188 ntBASIC5.22□□□□□ -1.57
CLRN1P58418 MIR6780B-201ENST00000610307 79 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms