Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH11P55287 AL445984.1-201ENST00000637834 659 ntBASIC4.6□□□□□ -1.67
CDH11P55287 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDH11P55287 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH11P55287 RBPJP2-201ENST00000618187 1444 ntBASIC4.6□□□□□ -1.67
CDH11P55287 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH11P55287 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CDH11P55287 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CDH11P55287 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH11P55287 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH11P55287 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 UBBP2-201ENST00000376781 231 ntBASIC4.59□□□□□ -1.67
CDH11P55287 RNU6-481P-201ENST00000384194 107 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AL359643.1-201ENST00000404109 423 ntBASIC4.59□□□□□ -1.67
CDH11P55287 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.59□□□□□ -1.67
CDH11P55287 U3.36-201ENST00000408418 213 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH11P55287 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 PNRC2P1-201ENST00000423940 420 ntBASIC4.59□□□□□ -1.67
CDH11P55287 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH11P55287 FO393414.1-201ENST00000428697 1184 ntBASIC4.59□□□□□ -1.67
CDH11P55287 RPL12P3-201ENST00000440080 396 ntBASIC4.59□□□□□ -1.67
CDH11P55287 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH11P55287 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH11P55287 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH11P55287 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH11P55287 RPL21P18-201ENST00000469899 480 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC037198.2-201ENST00000478845 733 ntBASIC4.59□□□□□ -1.67
CDH11P55287 RPL21P47-201ENST00000483696 477 ntBASIC4.59□□□□□ -1.67
CDH11P55287 SNRPCP2-201ENST00000504370 475 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH11P55287 UGT2B26P-201ENST00000508672 1613 ntBASIC4.59□□□□□ -1.67
CDH11P55287 GTF2F2P1-201ENST00000511083 675 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 RNA5SP373-201ENST00000517271 95 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC109635.6-201ENST00000525487 1113 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AP002373.2-201ENST00000541631 1060 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH11P55287 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH11P55287 YWHAZP1-201ENST00000556286 722 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH11P55287 AC006116.3-201ENST00000592968 361 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC084373.1-201ENST00000603311 235 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC095055.1-201ENST00000603472 1113 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 AC004948.1-201ENST00000609858 672 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AL355816.2-201ENST00000610049 647 ntBASIC4.59□□□□□ -1.67
CDH11P55287 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH11P55287 AL356274.1-201ENST00000617064 410 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC090510.2-201ENST00000617465 629 ntBASIC4.59□□□□□ -1.67
CDH11P55287 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 AC022960.3-201ENST00000619794 441 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC022106.2-201ENST00000620114 757 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC015660.5-201ENST00000623238 564 ntBASIC4.59□□□□□ -1.67
CDH11P55287 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH11P55287 AL121950.1-201ENST00000624993 2077 ntBASIC4.59□□□□□ -1.67
CDH11P55287 OR4G3P-201ENST00000633500 913 ntBASIC4.59□□□□□ -1.67
CDH11P55287 AC099654.8-201ENST00000637757 681 ntBASIC4.59□□□□□ -1.67
CDH11P55287 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH11P55287 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CDH11P55287 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
CDH11P55287 SCN1A-220ENST00000641603 12506 ntBASIC4.58□□□□□ -1.68
CDH11P55287 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.58□□□□□ -1.68
CDH11P55287 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH11P55287 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH11P55287 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH11P55287 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH11P55287 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CDH11P55287 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.58□□□□□ -1.68
CDH11P55287 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 SNORA2.3-201ENST00000383920 135 ntBASIC4.58□□□□□ -1.68
CDH11P55287 RNU6-1320P-201ENST00000390838 107 ntBASIC4.58□□□□□ -1.68
CDH11P55287 RNU6-1269P-201ENST00000391139 107 ntBASIC4.58□□□□□ -1.68
CDH11P55287 GAPDHP15-201ENST00000398586 975 ntBASIC4.58□□□□□ -1.68
CDH11P55287 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CDH11P55287 HMGB3P19-201ENST00000403971 560 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH11P55287 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AC092447.2-201ENST00000435487 669 ntBASIC4.58□□□□□ -1.68
CDH11P55287 TMX2P1-201ENST00000436507 708 ntBASIC4.58□□□□□ -1.68
CDH11P55287 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.58□□□□□ -1.68
CDH11P55287 AL645638.1-201ENST00000440519 361 ntBASIC4.58□□□□□ -1.68
CDH11P55287 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.58□□□□□ -1.68
CDH11P55287 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 AC073850.1-201ENST00000449243 255 ntBASIC4.58□□□□□ -1.68
CDH11P55287 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.58□□□□□ -1.68
CDH11P55287 RNU6-599P-201ENST00000459383 107 ntBASIC4.58□□□□□ -1.68
CDH11P55287 RNU6-1193P-201ENST00000459461 107 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms