Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RPL23AP56-201ENST00000460778 453 ntBASIC5.05□□□□□ -1.6
SSR1P43307 RN7SL629P-201ENST00000489622 285 ntBASIC5.05□□□□□ -1.6
SSR1P43307 AC020890.1-201ENST00000491837 504 ntBASIC5.05□□□□□ -1.6
SSR1P43307 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.05□□□□□ -1.6
SSR1P43307 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.05□□□□□ -1.6
SSR1P43307 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.05□□□□□ -1.6
SSR1P43307 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.05□□□□□ -1.6
SSR1P43307 AC093249.4-201ENST00000564755 259 ntBASIC5.05□□□□□ -1.6
SSR1P43307 RNF138P2-201ENST00000603490 592 ntBASIC5.05□□□□□ -1.6
SSR1P43307 AL121932.1-201ENST00000605542 214 ntBASIC5.05□□□□□ -1.6
SSR1P43307 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.05□□□□□ -1.6
SSR1P43307 AC010424.2-201ENST00000607594 443 ntBASIC5.05□□□□□ -1.6
SSR1P43307 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.05□□□□□ -1.6
SSR1P43307 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSR1P43307 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.04□□□□□ -1.6
SSR1P43307 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SSR1P43307 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.04□□□□□ -1.6
SSR1P43307 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
SSR1P43307 MIR765-201ENST00000390226 114 ntBASIC5.04□□□□□ -1.6
SSR1P43307 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSR1P43307 RNA5SP345-201ENST00000410646 108 ntBASIC5.04□□□□□ -1.6
SSR1P43307 AC098592.2-201ENST00000413158 265 ntBASIC5.04□□□□□ -1.6
SSR1P43307 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.04□□□□□ -1.6
SSR1P43307 CHEK2P3-201ENST00000416118 248 ntBASIC5.04□□□□□ -1.6
SSR1P43307 AC004552.1-201ENST00000419089 348 ntBASIC5.04□□□□□ -1.6
SSR1P43307 RPL12P43-201ENST00000420608 499 ntBASIC5.04□□□□□ -1.6
SSR1P43307 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.04□□□□□ -1.6
SSR1P43307 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.04□□□□□ -1.6
SSR1P43307 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.04□□□□□ -1.6
SSR1P43307 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.04□□□□□ -1.6
SSR1P43307 PSMD10P3-201ENST00000437000 448 ntBASIC5.04□□□□□ -1.6
SSR1P43307 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSR1P43307 AC112498.1-201ENST00000444401 332 ntBASIC5.04□□□□□ -1.6
SSR1P43307 SLC25A18P1-201ENST00000449385 454 ntBASIC5.04□□□□□ -1.6
SSR1P43307 RPS26P3-201ENST00000470205 348 ntBASIC5.04□□□□□ -1.6
SSR1P43307 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.04□□□□□ -1.6
SSR1P43307 AC090543.2-201ENST00000483963 348 ntBASIC5.04□□□□□ -1.6
SSR1P43307 AC004057.1-201ENST00000485827 348 ntBASIC5.04□□□□□ -1.6
SSR1P43307 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.04□□□□□ -1.6
SSR1P43307 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.04□□□□□ -1.6
SSR1P43307 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.04□□□□□ -1.6
SSR1P43307 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.04□□□□□ -1.6
SSR1P43307 AC133555.2-201ENST00000550213 292 ntBASIC5.04□□□□□ -1.6
SSR1P43307 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.04□□□□□ -1.6
SSR1P43307 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.04□□□□□ -1.6
SSR1P43307 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.04□□□□□ -1.6
SSR1P43307 ADAM3B-201ENST00000569937 840 ntBASIC5.04□□□□□ -1.6
SSR1P43307 AC010200.2-201ENST00000605098 235 ntBASIC5.04□□□□□ -1.6
SSR1P43307 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSR1P43307 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSR1P43307 MAPK10-263ENST00000641052 4307 ntBASIC5.04□□□□□ -1.6
SSR1P43307 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSR1P43307 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSR1P43307 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSR1P43307 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSR1P43307 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSR1P43307 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSR1P43307 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.03□□□□□ -1.6
SSR1P43307 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSR1P43307 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.03□□□□□ -1.6
SSR1P43307 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SSR1P43307 CHMP1B2P-201ENST00000399581 597 ntBASIC5.03□□□□□ -1.6
SSR1P43307 U3.35-201ENST00000408405 208 ntBASIC5.03□□□□□ -1.6
SSR1P43307 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSR1P43307 RN7SKP213-201ENST00000410746 298 ntBASIC5.03□□□□□ -1.6
SSR1P43307 RNA5SP104-201ENST00000410989 118 ntBASIC5.03□□□□□ -1.6
SSR1P43307 RBMY2QP-201ENST00000429799 1147 ntBASIC5.03□□□□□ -1.6
SSR1P43307 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.03□□□□□ -1.6
SSR1P43307 EXTL2P1-201ENST00000446218 416 ntBASIC5.03□□□□□ -1.6
SSR1P43307 AC010733.1-201ENST00000451515 401 ntBASIC5.03□□□□□ -1.6
SSR1P43307 FABP3P2-201ENST00000453169 399 ntBASIC5.03□□□□□ -1.6
SSR1P43307 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.03□□□□□ -1.6
SSR1P43307 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.03□□□□□ -1.6
SSR1P43307 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.03□□□□□ -1.6
SSR1P43307 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.03□□□□□ -1.6
SSR1P43307 AP001521.2-201ENST00000608772 546 ntBASIC5.03□□□□□ -1.6
SSR1P43307 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.03□□□□□ -1.6
SSR1P43307 AL512624.1-201ENST00000613638 469 ntBASIC5.03□□□□□ -1.6
SSR1P43307 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.03□□□□□ -1.6
SSR1P43307 AP002799.1-201ENST00000623552 423 ntBASIC5.03□□□□□ -1.6
SSR1P43307 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSR1P43307 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSR1P43307 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SSR1P43307 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.03□□□□□ -1.6
SSR1P43307 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.03□□□□□ -1.6
SSR1P43307 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.02□□□□□ -1.61
SSR1P43307 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SSR1P43307 AL031985.3-201ENST00000565390 2449 ntBASIC5.02□□□□□ -1.61
SSR1P43307 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.02□□□□□ -1.61
SSR1P43307 RNA5SP507-201ENST00000363603 121 ntBASIC5.02□□□□□ -1.61
SSR1P43307 RN7SKP269-201ENST00000365545 319 ntBASIC5.02□□□□□ -1.61
SSR1P43307 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.02□□□□□ -1.61
SSR1P43307 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.02□□□□□ -1.61
SSR1P43307 AC093414.1-201ENST00000434712 514 ntBASIC5.02□□□□□ -1.61
SSR1P43307 RPL7P11-201ENST00000437586 658 ntBASIC5.02□□□□□ -1.61
SSR1P43307 AC092013.1-201ENST00000438795 332 ntBASIC5.02□□□□□ -1.61
SSR1P43307 MRPL48P1-201ENST00000445390 636 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms