Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CASP1P29466 AC105074.1-201ENST00000623380 3095 ntBASIC4.79□□□□□ -1.64
CASP1P29466 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.79□□□□□ -1.64
CASP1P29466 SAMMSON-213ENST00000641336 1521 ntBASIC4.79□□□□□ -1.64
CASP1P29466 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASP1P29466 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CASP1P29466 RNA5SP52-201ENST00000362448 134 ntBASIC4.79□□□□□ -1.64
CASP1P29466 RNU1-94P-201ENST00000362627 173 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AL732292.1-201ENST00000426692 226 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.79□□□□□ -1.64
CASP1P29466 FTLP19-201ENST00000433300 394 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.79□□□□□ -1.64
CASP1P29466 RN7SL459P-201ENST00000481078 302 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AC013356.1-201ENST00000489027 564 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.79□□□□□ -1.64
CASP1P29466 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.79□□□□□ -1.64
CASP1P29466 PGBD4P4-201ENST00000509673 613 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AC010476.1-201ENST00000519111 851 ntBASIC4.79□□□□□ -1.64
CASP1P29466 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.79□□□□□ -1.64
CASP1P29466 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CASP1P29466 AL109766.1-201ENST00000555080 552 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP1P29466 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.79□□□□□ -1.64
CASP1P29466 AC113403.1-201ENST00000604910 193 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AC064801.1-201ENST00000612025 407 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AL353684.1-201ENST00000622677 1120 ntBASIC4.79□□□□□ -1.64
CASP1P29466 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP1P29466 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP1P29466 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.79□□□□□ -1.64
CASP1P29466 AC012618.3-205ENST00000637896 1496 ntBASIC4.79□□□□□ -1.64
CASP1P29466 ZNF962P-201ENST00000443465 3140 ntBASIC4.79□□□□□ -1.64
CASP1P29466 AC139713.2-214ENST00000642059 1811 ntBASIC4.79□□□□□ -1.64
CASP1P29466 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CASP1P29466 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASP1P29466 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
CASP1P29466 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CASP1P29466 LINC01109-201ENST00000603837 3081 ntBASIC4.78□□□□□ -1.64
CASP1P29466 RNA5SP175-201ENST00000364275 119 ntBASIC4.78□□□□□ -1.64
CASP1P29466 MIR585-201ENST00000384887 94 ntBASIC4.78□□□□□ -1.64
CASP1P29466 MIR513A2-201ENST00000385249 127 ntBASIC4.78□□□□□ -1.64
CASP1P29466 U3.22-201ENST00000391120 215 ntBASIC4.78□□□□□ -1.64
CASP1P29466 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASP1P29466 RPL26P29-201ENST00000415623 438 ntBASIC4.78□□□□□ -1.64
CASP1P29466 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP1P29466 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.78□□□□□ -1.64
CASP1P29466 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.78□□□□□ -1.64
CASP1P29466 EIF2S2P5-201ENST00000457635 968 ntBASIC4.78□□□□□ -1.64
CASP1P29466 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.78□□□□□ -1.64
CASP1P29466 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP1P29466 AC093890.1-201ENST00000502554 540 ntBASIC4.78□□□□□ -1.64
CASP1P29466 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.78□□□□□ -1.64
CASP1P29466 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP1P29466 AC134698.5-201ENST00000519444 336 ntBASIC4.78□□□□□ -1.64
CASP1P29466 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.78□□□□□ -1.64
CASP1P29466 SNX18P1Y-201ENST00000616231 511 ntBASIC4.78□□□□□ -1.64
CASP1P29466 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.78□□□□□ -1.64
CASP1P29466 MIR6730-201ENST00000622213 67 ntBASIC4.78□□□□□ -1.64
CASP1P29466 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CASP1P29466 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CASP1P29466 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.78□□□□□ -1.64
CASP1P29466 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CASP1P29466 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.78□□□□□ -1.64
CASP1P29466 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CASP1P29466 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.78□□□□□ -1.64
CASP1P29466 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CASP1P29466 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CASP1P29466 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.78□□□□□ -1.64
CASP1P29466 BTBD10P1-201ENST00000549824 1352 ntBASIC4.78□□□□□ -1.64
CASP1P29466 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CASP1P29466 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP1P29466 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP1P29466 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CASP1P29466 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CASP1P29466 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CASP1P29466 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CASP1P29466 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CASP1P29466 RNA5SP447-201ENST00000363749 119 ntBASIC4.77□□□□□ -1.65
CASP1P29466 SSR1P1-201ENST00000407630 814 ntBASIC4.77□□□□□ -1.65
CASP1P29466 RNA5SP36-201ENST00000410197 133 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.77□□□□□ -1.65
CASP1P29466 FHP1-201ENST00000442741 703 ntBASIC4.77□□□□□ -1.65
CASP1P29466 SERPINA7P1-201ENST00000443077 631 ntBASIC4.77□□□□□ -1.65
CASP1P29466 PHBP16-201ENST00000446318 950 ntBASIC4.77□□□□□ -1.65
CASP1P29466 EEF1A1P1-201ENST00000447052 739 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.77□□□□□ -1.65
CASP1P29466 NDUFA12P1-201ENST00000455914 406 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AC007686.1-201ENST00000488511 463 ntBASIC4.77□□□□□ -1.65
CASP1P29466 RN7SL812P-201ENST00000493791 279 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.77□□□□□ -1.65
CASP1P29466 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.77□□□□□ -1.65
CASP1P29466 AC006064.5-201ENST00000541782 248 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.77□□□□□ -1.65
CASP1P29466 AC008745.1-201ENST00000604064 271 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AC090948.1-201ENST00000607464 549 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AL121873.1-201ENST00000616013 524 ntBASIC4.77□□□□□ -1.65
CASP1P29466 uc_338.13-201ENST00000618243 179 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AC079298.2-201ENST00000623885 459 ntBASIC4.77□□□□□ -1.65
CASP1P29466 AP003497.2-201ENST00000624220 967 ntBASIC4.77□□□□□ -1.65
CASP1P29466 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP1P29466 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms