Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC011815.3-201ENST00000624194 473 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 AL121594.5-201ENST00000631724 573 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.75□□□□□ -1.49
POLR2AP24928 MAPK10-304ENST00000641341 3984 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC5.75□□□□□ -1.49
POLR2AP24928 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 OR6C69P-201ENST00000394268 893 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AL357515.1-201ENST00000402967 542 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 RPL5P19-201ENST00000404228 893 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 BX664727.1-201ENST00000416024 466 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 TBCAP2-201ENST00000416175 326 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AL606495.1-201ENST00000422100 813 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.75□□□□□ -1.49
POLR2AP24928 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.75□□□□□ -1.49
POLR2AP24928 AL365396.1-201ENST00000430854 671 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.75□□□□□ -1.49
POLR2AP24928 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.75□□□□□ -1.49
POLR2AP24928 FHP1-201ENST00000442741 703 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AC006326.1-201ENST00000445465 787 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 AC090804.1-201ENST00000448870 490 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 VN1R40P-201ENST00000455196 941 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.75□□□□□ -1.49
POLR2AP24928 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 AC087373.1-201ENST00000524920 491 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.75□□□□□ -1.49
POLR2AP24928 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 AP005136.1-201ENST00000579765 429 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 NBR2-204ENST00000587322 63 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AC011492.1-201ENST00000600023 315 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AC068790.6-201ENST00000602558 258 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AL133507.1-201ENST00000605269 557 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.75□□□□□ -1.49
POLR2AP24928 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.75□□□□□ -1.49
POLR2AP24928 VN1R9P-201ENST00000614184 867 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 MIR6839-201ENST00000620425 113 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 AC069542.2-201ENST00000624816 216 ntBASIC5.75□□□□□ -1.49
POLR2AP24928 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
POLR2AP24928 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.74□□□□□ -1.49
POLR2AP24928 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 MSL3P1-202ENST00000440028 1468 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.74□□□□□ -1.49
POLR2AP24928 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.74□□□□□ -1.49
POLR2AP24928 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
POLR2AP24928 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
POLR2AP24928 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
POLR2AP24928 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 AC092681.1-201ENST00000297369 291 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 Y_RNA.169-201ENST00000363745 96 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 RN7SKP227-201ENST00000364445 330 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 RN7SKP153-201ENST00000365026 316 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 SNORD116-9-201ENST00000384000 95 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 SNORD116-3-201ENST00000384287 95 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 SNORD116-7-201ENST00000384404 95 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 SNORD116-5-201ENST00000384462 95 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 RPL17P50-201ENST00000396131 546 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.74□□□□□ -1.49
POLR2AP24928 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 AC007000.2-201ENST00000442564 487 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 SNORA84-201ENST00000459229 133 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 AC034236.1-201ENST00000469891 373 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 AC022034.3-201ENST00000471393 478 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.74□□□□□ -1.49
POLR2AP24928 RFPL1S-203ENST00000539579 330 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 AC027667.1-201ENST00000545814 304 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.74□□□□□ -1.49
POLR2AP24928 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.74□□□□□ -1.49
POLR2AP24928 AC090286.3-201ENST00000573133 187 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 AC010620.1-201ENST00000601088 1102 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 AC093673.2-201ENST00000609674 331 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 FAM27B-201ENST00000610601 213 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
POLR2AP24928 AP000547.3-204ENST00000588548 2523 ntBASIC5.74□□□□□ -1.49
POLR2AP24928 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms