Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 OR5H15-201ENST00000383696 930 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 RNU6-1122P-201ENST00000384449 107 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 VDAC2P1-201ENST00000399358 958 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 RN7SKP142-201ENST00000411236 328 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 PIGPP2-201ENST00000411569 458 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 GSTM3P2-201ENST00000412746 530 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC245060.4-201ENST00000413293 1121 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AL096829.1-201ENST00000413677 457 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC007394.1-201ENST00000421941 531 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC3P19447 AL353706.1-201ENST00000436728 494 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC3P19447 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 AL445466.1-201ENST00000448432 357 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC092967.1-201ENST00000449016 481 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 NF1P3-201ENST00000457709 450 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 SNX18P26-201ENST00000458433 740 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 CCDC75P1-201ENST00000469247 791 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 RN7SL177P-201ENST00000476596 299 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC090071.1-201ENST00000507713 644 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC3P19447 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 WBP1LP3-201ENST00000523033 208 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC092851.1-201ENST00000535964 478 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 SERPINE4P-201ENST00000554978 281 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC027229.1-201ENST00000583887 253 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 MIR3611-201ENST00000584484 83 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 AC243756.2-201ENST00000618406 463 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC092650.2-201ENST00000619984 902 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AL356266.1-201ENST00000623311 483 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC092656.1-203ENST00000624134 423 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC3P19447 LINC01739-205ENST00000641890 573 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC099063.3-201ENST00000642066 185 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC3P19447 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 AC134882.1-201ENST00000603738 1676 ntBASIC7.02□□□□□ -1.29
ERCC3P19447 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
ERCC3P19447 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC3P19447 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC3P19447 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
ERCC3P19447 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ERCC3P19447 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC3P19447 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 RARSP1-201ENST00000542842 1418 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
ERCC3P19447 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 AC024587.1-201ENST00000505925 2157 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC3P19447 TCP11X1-202ENST00000622971 1372 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
ERCC3P19447 AL672167.1-206ENST00000356293 943 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AGR3-202ENST00000402239 563 ntTSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 CYCSP45-201ENST00000402289 315 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 GAPDHP42-201ENST00000406848 981 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 RN7SKP273-201ENST00000411392 314 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.01□□□□□ -1.29
ERCC3P19447 RPS26P38-201ENST00000414476 348 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 UBE2V1P14-201ENST00000415815 558 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.01□□□□□ -1.29
ERCC3P19447 AC062016.2-201ENST00000420950 676 ntBASIC7.01□□□□□ -1.29
ERCC3P19447 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms