Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RAB5CP1-201ENST00000395972 580 ntBASIC4.98□□□□□ -1.61
TPM1P09493 CHMP1B2P-201ENST00000399581 597 ntBASIC4.98□□□□□ -1.61
TPM1P09493 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM1P09493 RNU2-50P-201ENST00000410494 143 ntBASIC4.98□□□□□ -1.61
TPM1P09493 RPS26P47-201ENST00000427219 348 ntBASIC4.98□□□□□ -1.61
TPM1P09493 HLA-N-201ENST00000437516 135 ntBASIC4.98□□□□□ -1.61
TPM1P09493 CASP3P1-201ENST00000446037 609 ntBASIC4.98□□□□□ -1.61
TPM1P09493 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 APOOP2-201ENST00000461561 539 ntBASIC4.98□□□□□ -1.61
TPM1P09493 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.98□□□□□ -1.61
TPM1P09493 MTCYBP19-201ENST00000517463 1124 ntBASIC4.98□□□□□ -1.61
TPM1P09493 IFITM8P-201ENST00000522529 394 ntBASIC4.98□□□□□ -1.61
TPM1P09493 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.98□□□□□ -1.61
TPM1P09493 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM1P09493 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.98□□□□□ -1.61
TPM1P09493 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.98□□□□□ -1.61
TPM1P09493 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.98□□□□□ -1.61
TPM1P09493 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.98□□□□□ -1.61
TPM1P09493 AC103858.2-201ENST00000621471 543 ntBASIC4.98□□□□□ -1.61
TPM1P09493 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.98□□□□□ -1.61
TPM1P09493 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.98□□□□□ -1.61
TPM1P09493 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 AC108467.2-201ENST00000617640 1597 ntBASIC4.98□□□□□ -1.61
TPM1P09493 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TPM1P09493 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TPM1P09493 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
TPM1P09493 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 SNORA71.2-201ENST00000364941 134 ntBASIC4.97□□□□□ -1.61
TPM1P09493 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 TRIM60P17-201ENST00000415181 719 ntBASIC4.97□□□□□ -1.61
TPM1P09493 AC093162.1-201ENST00000419682 124 ntBASIC4.97□□□□□ -1.61
TPM1P09493 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.97□□□□□ -1.61
TPM1P09493 AC079807.1-201ENST00000429993 481 ntBASIC4.97□□□□□ -1.61
TPM1P09493 AC022022.1-201ENST00000430304 178 ntBASIC4.97□□□□□ -1.61
TPM1P09493 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 MTND2P2-201ENST00000434633 945 ntBASIC4.97□□□□□ -1.61
TPM1P09493 OR1H1P-201ENST00000448731 937 ntBASIC4.97□□□□□ -1.61
TPM1P09493 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.97□□□□□ -1.61
TPM1P09493 AC104763.1-201ENST00000475274 360 ntBASIC4.97□□□□□ -1.61
TPM1P09493 RPL37AP8-201ENST00000494116 276 ntBASIC4.97□□□□□ -1.61
TPM1P09493 PGBD4P4-201ENST00000509673 613 ntBASIC4.97□□□□□ -1.61
TPM1P09493 PARP4P3-201ENST00000510265 317 ntBASIC4.97□□□□□ -1.61
TPM1P09493 RPL7L1P4-201ENST00000513004 707 ntBASIC4.97□□□□□ -1.61
TPM1P09493 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.97□□□□□ -1.61
TPM1P09493 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.97□□□□□ -1.61
TPM1P09493 OR10G5P-201ENST00000532733 358 ntBASIC4.97□□□□□ -1.61
TPM1P09493 AC090312.1-201ENST00000580637 348 ntBASIC4.97□□□□□ -1.61
TPM1P09493 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TPM1P09493 AP002360.3-201ENST00000607673 710 ntBASIC4.97□□□□□ -1.61
TPM1P09493 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.97□□□□□ -1.61
TPM1P09493 AC091905.4-201ENST00000623432 202 ntBASIC4.97□□□□□ -1.61
TPM1P09493 AP003400.2-201ENST00000624036 666 ntBASIC4.97□□□□□ -1.61
TPM1P09493 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.97□□□□□ -1.61
TPM1P09493 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
TPM1P09493 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.97□□□□□ -1.61
TPM1P09493 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.97□□□□□ -1.61
TPM1P09493 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 AC010300.1-201ENST00000600671 5134 ntBASIC4.97□□□□□ -1.61
TPM1P09493 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
TPM1P09493 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.96□□□□□ -1.61
TPM1P09493 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TPM1P09493 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM1P09493 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TPM1P09493 BX005019.1-201ENST00000561881 1810 ntBASIC4.96□□□□□ -1.62
TPM1P09493 AC011155.1-201ENST00000316512 456 ntBASIC4.96□□□□□ -1.62
TPM1P09493 RNU1-15P-201ENST00000353977 144 ntBASIC4.96□□□□□ -1.62
TPM1P09493 OR51B3P-201ENST00000412287 913 ntBASIC4.96□□□□□ -1.62
TPM1P09493 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM1P09493 ELOCP18-201ENST00000434209 337 ntBASIC4.96□□□□□ -1.62
TPM1P09493 AL353597.2-202ENST00000434901 373 ntBASIC4.96□□□□□ -1.62
TPM1P09493 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM1P09493 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TPM1P09493 RPSAP41-201ENST00000439695 860 ntBASIC4.96□□□□□ -1.62
TPM1P09493 FHP1-201ENST00000442741 703 ntBASIC4.96□□□□□ -1.62
TPM1P09493 IGLV2-34-201ENST00000490007 283 ntBASIC4.96□□□□□ -1.62
TPM1P09493 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.96□□□□□ -1.62
TPM1P09493 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TPM1P09493 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM1P09493 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.96□□□□□ -1.62
TPM1P09493 AC007225.2-201ENST00000562529 256 ntBASIC4.96□□□□□ -1.62
TPM1P09493 AC011487.3-201ENST00000593607 453 ntBASIC4.96□□□□□ -1.62
TPM1P09493 AC068790.5-201ENST00000602741 355 ntBASIC4.96□□□□□ -1.62
TPM1P09493 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.96□□□□□ -1.62
TPM1P09493 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TPM1P09493 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TPM1P09493 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.95□□□□□ -1.62
TPM1P09493 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.95□□□□□ -1.62
TPM1P09493 AC139769.1-204ENST00000472297 1931 ntBASIC4.95□□□□□ -1.62
TPM1P09493 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TPM1P09493 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
TPM1P09493 RNU4-4P-201ENST00000364588 130 ntBASIC4.95□□□□□ -1.62
TPM1P09493 RNA5SP151-201ENST00000365632 117 ntBASIC4.95□□□□□ -1.62
TPM1P09493 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TPM1P09493 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms