Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AP000484.1-201ENST00000620067 1252 ntBASIC4.66□□□□□ -1.66
ZIC3O60481 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.66□□□□□ -1.66
ZIC3O60481 AC138907.10-201ENST00000623708 983 ntBASIC4.66□□□□□ -1.66
ZIC3O60481 AC017104.5-201ENST00000637647 639 ntBASIC4.66□□□□□ -1.66
ZIC3O60481 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZIC3O60481 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZIC3O60481 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZIC3O60481 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZIC3O60481 AC004158.1-201ENST00000564508 4319 ntBASIC4.66□□□□□ -1.66
ZIC3O60481 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ZIC3O60481 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZIC3O60481 HSPA8P18-201ENST00000439846 1928 ntBASIC4.66□□□□□ -1.66
ZIC3O60481 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZIC3O60481 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ZIC3O60481 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZIC3O60481 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.65□□□□□ -1.66
ZIC3O60481 AC093311.1-201ENST00000506586 2021 ntBASIC4.65□□□□□ -1.66
ZIC3O60481 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ZIC3O60481 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC4.65□□□□□ -1.66
ZIC3O60481 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.65□□□□□ -1.66
ZIC3O60481 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
ZIC3O60481 ENSAP3-201ENST00000312710 333 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ZIC3O60481 ANKRD36P1-201ENST00000344424 659 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ZIC3O60481 RNA5SP223-201ENST00000365174 120 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ZIC3O60481 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZIC3O60481 AL645927.1-201ENST00000396783 406 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 VTI1BP4-201ENST00000427516 527 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 BRWD1P3-201ENST00000428816 390 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 CETN4P-201ENST00000432407 469 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 LYPLA1P1-201ENST00000434514 622 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 FTH1P16-201ENST00000435241 552 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.65□□□□□ -1.67
ZIC3O60481 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC092170.1-201ENST00000440211 356 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 CR769776.1-201ENST00000441254 787 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 ARL5AP2-201ENST00000444698 533 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC079203.1-201ENST00000487972 404 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC016559.2-201ENST00000510759 359 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC098976.1-201ENST00000513014 541 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZIC3O60481 MTND2P38-201ENST00000522536 667 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 OR7E128P-201ENST00000532736 1024 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC092490.3-201ENST00000545370 572 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC051619.2-201ENST00000559063 397 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 MTND3P12-201ENST00000559068 328 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.65□□□□□ -1.67
ZIC3O60481 AC095057.3-201ENST00000567102 1157 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ZIC3O60481 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
ZIC3O60481 CCDC58P3-201ENST00000590792 430 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 AP005432.2-201ENST00000608162 586 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AL451049.1-201ENST00000608672 497 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.65□□□□□ -1.67
ZIC3O60481 AL355493.4-201ENST00000618530 292 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AL121895.2-201ENST00000619558 447 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AC011330.2-201ENST00000621680 635 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AP002791.1-201ENST00000623291 381 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AP002799.1-201ENST00000623552 423 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 AL121594.5-201ENST00000631724 573 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZIC3O60481 SEC63P2-201ENST00000503863 1939 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZIC3O60481 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ZIC3O60481 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ZIC3O60481 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.65□□□□□ -1.67
ZIC3O60481 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 GVINP1-202ENST00000531871 7271 ntBASIC4.65□□□□□ -1.67
ZIC3O60481 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 AC007996.1-201ENST00000620414 2821 ntBASIC4.64□□□□□ -1.67
ZIC3O60481 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.64□□□□□ -1.67
ZIC3O60481 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.64□□□□□ -1.67
ZIC3O60481 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.64□□□□□ -1.67
ZIC3O60481 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
ZIC3O60481 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
ZIC3O60481 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms