Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC092647.3-201ENST00000443044 633 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC234781.3-201ENST00000452540 973 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC016724.1-201ENST00000453215 421 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC28A1O00337 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC28A1O00337 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC28A1O00337 AC022795.1-201ENST00000473808 480 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 RPL23AP37-201ENST00000479658 549 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC104971.1-201ENST00000495117 578 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 ARL4AP1-201ENST00000503220 705 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC28A1O00337 RNU1-6P-201ENST00000516290 144 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 RN7SKP147-201ENST00000517154 244 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC28A1O00337 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC28A1O00337 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
SLC28A1O00337 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC28A1O00337 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.58□□□□□ -1.68
SLC28A1O00337 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC28A1O00337 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.58□□□□□ -1.68
SLC28A1O00337 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC28A1O00337 MIR5699-201ENST00000578903 90 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 CBX3P2-202ENST00000583365 535 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC022726.1-201ENST00000587475 207 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AC020910.3-201ENST00000603701 874 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 ELOCP34-201ENST00000604436 327 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AL353600.1-201ENST00000608148 251 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC28A1O00337 AL121612.2-201ENST00000612261 482 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 AL359757.1-201ENST00000623176 255 ntBASIC4.58□□□□□ -1.68
SLC28A1O00337 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SLC28A1O00337 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SLC28A1O00337 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC28A1O00337 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC28A1O00337 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 AP001273.1-201ENST00000624493 3152 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
SLC28A1O00337 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 RNU4-31P-201ENST00000384211 141 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 RNU6-171P-201ENST00000384354 107 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 RNU6-185P-201ENST00000384421 107 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 RNU6-178P-201ENST00000384631 104 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SLC28A1O00337 MIR921-201ENST00000401133 56 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AL356057.1-202ENST00000402263 756 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 UBE2V1P15-201ENST00000407776 448 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 RNU4-74P-201ENST00000411280 161 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC105402.1-201ENST00000413336 545 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 RPL6P29-201ENST00000414863 865 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AC079355.1-201ENST00000421770 223 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 PRPF38AP2-201ENST00000438179 851 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC28A1O00337 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.57□□□□□ -1.68
SLC28A1O00337 MYO5BP2-201ENST00000449815 1277 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 BX284632.1-201ENST00000478218 541 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC28A1O00337 RPS27AP16-201ENST00000492222 470 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 RPS4XP18-201ENST00000495480 763 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC010627.1-201ENST00000503819 1294 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AC013701.1-201ENST00000522657 465 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC28A1O00337 HAUS8P1-201ENST00000549005 542 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC133555.2-201ENST00000550213 292 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 RN7SL802P-201ENST00000577858 299 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AC123786.2-201ENST00000603459 275 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC233280.2-201ENST00000603917 1070 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC28A1O00337 AC025175.1-201ENST00000606482 759 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC022467.1-201ENST00000614738 749 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AP004607.9-201ENST00000618202 316 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC28A1O00337 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC28A1O00337 HSPD1P11-201ENST00000508643 1702 ntBASIC4.57□□□□□ -1.68
SLC28A1O00337 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms