Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AL049539.1-201ENST00000611964 459 ntBASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRAPPC4Q9Y296 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 Y_RNA.62-201ENST00000362840 99 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 RN7SKP267-201ENST00000410381 285 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AL591848.1-201ENST00000413092 322 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC004552.1-201ENST00000419089 348 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC013470.3-201ENST00000420252 1194 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AL590762.4-201ENST00000425885 253 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 MAPRE1P3-201ENST00000435438 796 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC016831.4-201ENST00000438302 307 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 RPL7P33-201ENST00000444159 742 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 SEPT7P6-201ENST00000469999 1143 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 RPS26P3-201ENST00000470205 348 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC090543.2-201ENST00000483963 348 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC004057.1-201ENST00000485827 348 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC008694.2-201ENST00000517591 306 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 IGLV3-26-201ENST00000520756 302 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC018442.3-201ENST00000523025 183 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 SOX5P1-201ENST00000524155 1127 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 DUX4L52-201ENST00000549363 777 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC122134.1-201ENST00000565664 1104 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC091042.1-201ENST00000579213 173 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 MIR4436B2-201ENST00000581415 91 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 MIR4436B1-201ENST00000583272 91 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC096553.1-201ENST00000605169 829 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AL121873.1-201ENST00000616013 524 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC107905.1-201ENST00000616204 426 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC074276.2-201ENST00000619891 348 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 AC132825.1-201ENST00000463573 2247 ntBASIC4.25□□□□□ -1.73
TRAPPC4Q9Y296 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AL136164.3-201ENST00000624429 3978 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RLIMP2-201ENST00000427891 1563 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RNA5SP191-201ENST00000362585 102 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RNU1-82P-201ENST00000390851 165 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RSU1P3-201ENST00000412878 835 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC096644.3-201ENST00000416788 338 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RPL7P57-201ENST00000423238 740 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RPS12P5-201ENST00000423449 371 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 SKP1P3-201ENST00000429280 487 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 OR2B7P-201ENST00000429302 934 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC008072.1-201ENST00000434254 824 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 LYPLA1P1-201ENST00000434514 622 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RAB9AP5-201ENST00000437794 597 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC005154.2-201ENST00000438110 379 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RAB9AP2-201ENST00000443911 597 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC104306.1-201ENST00000449702 371 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 NPM1P39-201ENST00000449818 867 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 OR6C72P-201ENST00000451403 892 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC090142.1-201ENST00000465776 462 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC011005.3-201ENST00000491624 395 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 RN7SKP34-201ENST00000516142 244 ntBASIC4.24□□□□□ -1.73
TRAPPC4Q9Y296 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms