Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL050305.1-201ENST00000399993 1230 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 RNA5SP146-201ENST00000410743 123 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AL590139.1-201ENST00000416267 400 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 RAD23BP1-201ENST00000421404 1227 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 CENPIP1-201ENST00000425713 902 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 RPL21P6-201ENST00000479171 504 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC008897.1-201ENST00000494006 347 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 MTND4LP2-201ENST00000502312 285 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 RPS27AP18-201ENST00000515536 459 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC008147.3-201ENST00000548666 354 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC090181.2-201ENST00000602975 672 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC073091.2-201ENST00000603205 907 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC098935.2-201ENST00000604222 466 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 AC055839.1-201ENST00000634467 498 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 KARSP3-201ENST00000571212 1504 ntBASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.35□□□□□ -1.71
LRTM1Q9HBL6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AL590240.1-201ENST00000334118 313 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 RNA5SP22-201ENST00000365393 109 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 RPL17P36-201ENST00000420302 549 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC016712.1-201ENST00000431088 378 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 CDY14P-201ENST00000431260 1014 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 NPM1P33-201ENST00000438918 872 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 CDY12P-201ENST00000440679 1015 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 CDY13P-201ENST00000445813 1015 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 CDY23P-201ENST00000451661 1014 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 PSMC1P13-201ENST00000458195 985 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 STRADBP1-201ENST00000478954 1281 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC021733.2-201ENST00000518830 497 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 PARP1P2-201ENST00000556806 195 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 MIR4270-201ENST00000581799 70 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 BPIFA4P-203ENST00000603168 689 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC010201.1-201ENST00000605051 540 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC023509.5-201ENST00000617434 807 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC017104.4-201ENST00000636283 1592 ntBASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LRTM1Q9HBL6 AC083843.3-201ENST00000623679 2186 ntBASIC4.34□□□□□ -1.72
LRTM1Q9HBL6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
LRTM1Q9HBL6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
LRTM1Q9HBL6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
LRTM1Q9HBL6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 AC132825.1-201ENST00000463573 2247 ntBASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 AL606537.1-201ENST00000607258 2011 ntBASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 LINC00622-201ENST00000562811 1570 ntBASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 AC092111.2-201ENST00000611627 1414 ntBASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 AC021146.4-201ENST00000309229 279 ntBASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 RNVU1-6-201ENST00000364688 164 ntBASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.33□□□□□ -1.72
LRTM1Q9HBL6 SDHCP2-201ENST00000398565 501 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms