Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC112498.1-201ENST00000444401 332 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 NOP56P2-201ENST00000447491 769 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC090804.1-201ENST00000448870 490 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RN7SL205P-201ENST00000490174 284 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AP000563.1-201ENST00000490865 758 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC022133.1-201ENST00000490961 571 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 KCTD9P6-201ENST00000522306 950 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 OR4V1P-201ENST00000525394 1140 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AP003033.1-201ENST00000527244 415 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC010547.7-201ENST00000570323 333 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RN7SL52P-201ENST00000584271 284 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC068790.2-201ENST00000602601 557 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC105254.2-201ENST00000603636 436 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RN7SL722P-201ENST00000617780 284 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 RN7SL565P-201ENST00000618246 284 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AP003485.2-201ENST00000623636 610 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AP001642.1-201ENST00000624727 2117 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC073869.7-201ENST00000640874 297 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AC100778.3-201ENST00000580060 1750 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AL672167.1-204ENST00000641875 3017 ntBASIC5.28□□□□□ -1.56
EBF3Q9H4W6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
EBF3Q9H4W6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AL929601.4-201ENST00000613011 1341 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 RNU6-792P-201ENST00000363490 107 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 RN7SKP153-201ENST00000365026 316 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 OR1L6-202ENST00000373684 1044 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 VN1R51P-201ENST00000411675 945 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AL024507.1-201ENST00000412741 274 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 HSPD1P12-201ENST00000429127 1069 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 RPL34P6-201ENST00000432390 345 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 Z99127.2-201ENST00000441426 334 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AL591719.1-201ENST00000444669 744 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC006326.1-201ENST00000445465 787 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 RPL31P20-201ENST00000449593 360 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC020779.1-201ENST00000478757 796 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC008897.1-201ENST00000494006 347 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 MTCO3P27-201ENST00000514397 196 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC021451.1-201ENST00000523498 1129 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 OSBPL9P3-201ENST00000534523 595 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 GSTP1P1-201ENST00000548078 319 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC015726.1-201ENST00000602353 681 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC022022.2-201ENST00000602989 360 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 Z94722.1-201ENST00000604328 474 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 AC004775.1-201ENST00000607389 753 ntBASIC5.27□□□□□ -1.57
EBF3Q9H4W6 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.27□□□□□ -1.57
EBF3Q9H4W6 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms