Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 DHFRP1-201ENST00000579682 559 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 AC025449.1-201ENST00000603896 529 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP1Q96SZ6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDK5RAP1Q96SZ6 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDK5RAP1Q96SZ6 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDK5RAP1Q96SZ6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
CDK5RAP1Q96SZ6 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CDK5RAP1Q96SZ6 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDK5RAP1Q96SZ6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.84□□□□□ -1.48
CDK5RAP1Q96SZ6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 SAMM50P1-201ENST00000455403 1399 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 GAPDHP24-201ENST00000328713 983 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 FAM133CP-201ENST00000332869 704 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 Y_RNA.88-201ENST00000363029 99 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 Y_RNA.390-201ENST00000383932 102 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AL590084.1-201ENST00000407885 387 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC246680.2-201ENST00000422106 389 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AL049610.1-201ENST00000423374 372 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC244035.1-201ENST00000430042 390 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 BX119904.1-201ENST00000432026 348 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC098614.3-201ENST00000438957 440 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 RPL23AP23-201ENST00000452590 471 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 SNORD125-201ENST00000459538 96 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC100832.1-201ENST00000471945 383 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 ST13P12-201ENST00000508958 1094 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC026782.2-201ENST00000510845 636 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 IGLV3-24-201ENST00000517477 197 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 SEC11B-201ENST00000518383 499 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 ELOCP32-201ENST00000548625 324 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 ADI1P3-201ENST00000549509 470 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC087897.1-201ENST00000550134 156 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 ANP32BP3-201ENST00000559213 706 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR3176-201ENST00000582210 90 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC022146.1-201ENST00000595307 847 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AL136363.2-201ENST00000604173 851 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 HMGB1P51-201ENST00000605166 638 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC126118.1-201ENST00000607744 628 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC079395.2-201ENST00000610982 737 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC138749.5-201ENST00000611461 208 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC025574.2-201ENST00000615621 514 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC007742.2-201ENST00000618226 398 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 MIR8080-201ENST00000622224 89 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC132068.1-201ENST00000623805 459 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 CDC27P2-201ENST00000425026 1922 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC004656.1-201ENST00000568479 4951 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 AC109446.4-201ENST00000623235 2755 ntBASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP1Q96SZ6 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP1Q96SZ6 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms