Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 MTCO2P22-201ENST00000603246 681 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 AC034236.3-201ENST00000605999 461 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 BX323046.1-201ENST00000610145 535 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 AL158196.1-201ENST00000616786 434 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 AC131238.1-201ENST00000617135 328 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.73□□□□□ -1.65
VPS35Q96QK1 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VPS35Q96QK1 DDX18P3-201ENST00000404856 2007 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS35Q96QK1 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS35Q96QK1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
VPS35Q96QK1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VPS35Q96QK1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS35Q96QK1 AC107068.1-201ENST00000563286 4218 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VPS35Q96QK1 MAPK10-320ENST00000641462 6696 ntBASIC4.73□□□□□ -1.65
VPS35Q96QK1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.73□□□□□ -1.65
VPS35Q96QK1 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS35Q96QK1 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS35Q96QK1 RN7SKP103-201ENST00000363848 320 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AL049745.1-201ENST00000433953 286 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 VN1R48P-201ENST00000448149 1036 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC022431.1-201ENST00000450941 438 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC091868.1-201ENST00000508746 304 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 OR4V1P-201ENST00000525394 1140 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS35Q96QK1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC093249.4-201ENST00000564755 259 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC008536.1-201ENST00000602872 669 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC011815.3-201ENST00000624194 473 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS35Q96QK1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS35Q96QK1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS35Q96QK1 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VPS35Q96QK1 CASC19-206ENST00000641028 1430 ntBASIC4.72□□□□□ -1.65
VPS35Q96QK1 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
VPS35Q96QK1 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS35Q96QK1 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS35Q96QK1 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VPS35Q96QK1 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AL359922.3-201ENST00000624779 1670 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC007342.7-201ENST00000624610 2337 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 SNORA68.2-201ENST00000391263 128 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AL590762.2-201ENST00000395798 571 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 MIR937-201ENST00000401271 86 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 E2F6P2-201ENST00000420708 748 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 RPL36AP10-201ENST00000421785 322 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 NDUFA5P1-201ENST00000433858 341 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 MTND2P2-201ENST00000434633 945 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 MTCYBP29-201ENST00000436327 1006 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC016831.4-201ENST00000438302 307 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AL606490.8-201ENST00000441624 319 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 RHEBP2-201ENST00000450289 600 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC090686.1-201ENST00000481577 749 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC020890.1-201ENST00000491837 504 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS35Q96QK1 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 OR7H2P-201ENST00000513483 306 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AL110118.1-201ENST00000553543 400 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 BNIP3P32-201ENST00000600015 554 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC084373.1-201ENST00000603311 235 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC023813.4-201ENST00000607580 580 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS35Q96QK1 AC019080.5-201ENST00000624891 757 ntBASIC4.71□□□□□ -1.66
VPS35Q96QK1 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms