Protein–RNA interactions for Protein: Q96Q05

TRAPPC9, Trafficking protein particle complex subunit 9, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9Q96Q05 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 AC053481.2-202ENST00000582394 1500 ntBASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRAPPC9Q96Q05 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 Z95331.1-201ENST00000623075 23112 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 BTBD10P1-201ENST00000549824 1352 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 CASC19-221ENST00000641309 1382 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC093775.1-201ENST00000624154 1868 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 RNU1-19P-201ENST00000363306 165 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 SNORA16A-201ENST00000384342 137 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC009804.1-201ENST00000400949 179 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 RNU4-34P-201ENST00000410431 124 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 RPS24P8-201ENST00000431490 402 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AL009048.1-201ENST00000450437 298 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 RPL7P32-201ENST00000457119 744 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC011225.1-201ENST00000457751 369 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 RPL23AP12-201ENST00000467573 473 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC022795.1-201ENST00000473808 480 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC104108.1-201ENST00000509930 412 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 EIF3KP3-201ENST00000514461 639 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC027369.5-201ENST00000533838 755 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC087897.1-201ENST00000550134 156 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 SULT1C2P2-201ENST00000562517 294 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 MIR1269B-201ENST00000580405 75 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC005377.1-201ENST00000605126 456 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AL078595.3-201ENST00000623815 1166 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 RNF6P1-201ENST00000444889 1784 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 MAPK10-349ENST00000641767 3661 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 AC100871.1-201ENST00000507871 1456 ntBASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRAPPC9Q96Q05 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AL034549.2-201ENST00000618285 3373 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 OR4F13P-202ENST00000560066 2054 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 RNU6-317P-201ENST00000384031 107 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 MIR937-201ENST00000401271 86 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 OSTCP5-201ENST00000425293 453 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 OR2AH1P-201ENST00000425717 928 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 RPL7AP49-201ENST00000429522 581 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AL591438.1-201ENST00000433508 581 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 CYCSP12-201ENST00000437729 300 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AL592437.1-201ENST00000443781 492 ntBASIC5.3□□□□□ -1.56
TRAPPC9Q96Q05 AL606490.1-201ENST00000452266 765 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms