Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL160275.2-201ENST00000412010 394 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 NPM1P26-201ENST00000426339 738 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC42Q96M95 RPEP2-201ENST00000432149 701 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 UBE2V1P3-201ENST00000439651 417 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 ABCF2P2-201ENST00000450549 296 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 RNA5SP154-201ENST00000516193 111 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 MYL12AP1-201ENST00000518490 515 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 IFITM8P-201ENST00000522529 394 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 AC005034.4-201ENST00000603612 899 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 AL031666.3-201ENST00000609320 1006 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 AC015813.4-201ENST00000610469 179 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 AC006065.6-201ENST00000625201 545 ntBASIC4.75□□□□□ -1.65
CCDC42Q96M95 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC42Q96M95 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC42Q96M95 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC42Q96M95 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AC010928.1-201ENST00000592477 1447 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL606537.1-201ENST00000607258 2011 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 MIR448-201ENST00000362131 111 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 GAPDHP15-201ENST00000398586 975 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AP001324.1-201ENST00000428553 399 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 RPL31P44-201ENST00000447680 377 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 FGF7P3-201ENST00000454645 303 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AC104849.1-201ENST00000462623 405 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 RN7SL808P-201ENST00000496066 299 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AC107918.3-201ENST00000533272 382 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL445222.1-201ENST00000607259 628 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AC009704.2-201ENST00000618739 483 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AL023881.1-201ENST00000621088 301 ntBASIC4.74□□□□□ -1.65
CCDC42Q96M95 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.74□□□□□ -1.65
CCDC42Q96M95 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC42Q96M95 AC015813.6-201ENST00000624409 5808 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC42Q96M95 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC42Q96M95 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC42Q96M95 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC42Q96M95 SNORA51.1-201ENST00000363243 140 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 MIR513A2-201ENST00000385249 127 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 MIR708-201ENST00000390708 88 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 LAP3P1-201ENST00000403648 294 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 PTP4A1P1-201ENST00000420539 515 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC091685.2-201ENST00000454924 864 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC011411.1-201ENST00000509592 876 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC091042.1-201ENST00000579213 173 ntBASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.73□□□□□ -1.65
CCDC42Q96M95 AC087468.1-201ENST00000604365 630 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms