Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.17□□□□□ -1.42
USP47Q96K76 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.17□□□□□ -1.42
USP47Q96K76 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP47Q96K76 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.17□□□□□ -1.42
USP47Q96K76 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
USP47Q96K76 OR4K17-201ENST00000315543 1032 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 RNU1-20P-201ENST00000363314 162 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 SNORA48.7-201ENST00000391302 135 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.17□□□□□ -1.42
USP47Q96K76 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.17□□□□□ -1.42
USP47Q96K76 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.17□□□□□ -1.42
USP47Q96K76 PHBP16-201ENST00000446318 950 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 RPS27AP15-201ENST00000447672 466 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 RPL7P32-201ENST00000457119 744 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 RPL7AP52-201ENST00000458096 790 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 MTCO1P35-201ENST00000515270 228 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.17□□□□□ -1.42
USP47Q96K76 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.17□□□□□ -1.42
USP47Q96K76 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
USP47Q96K76 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.17□□□□□ -1.42
USP47Q96K76 AC016590.3-201ENST00000611171 753 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.17□□□□□ -1.42
USP47Q96K76 A2MP1-204ENST00000566278 4130 ntBASIC6.17□□□□□ -1.42
USP47Q96K76 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP47Q96K76 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP47Q96K76 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 AC007998.4-201ENST00000612496 2533 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP47Q96K76 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.16□□□□□ -1.42
USP47Q96K76 RNA5SP28-201ENST00000363841 119 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP47Q96K76 RPS29P17-201ENST00000430795 166 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.16□□□□□ -1.42
USP47Q96K76 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP47Q96K76 RN7SL691P-201ENST00000494487 301 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.16□□□□□ -1.42
USP47Q96K76 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 OR5BC1P-201ENST00000529327 739 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.16□□□□□ -1.42
USP47Q96K76 uc_338.13-201ENST00000618243 179 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 AL445363.3-201ENST00000623080 671 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 AP003497.2-201ENST00000624220 967 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 FP325313.1-201ENST00000638228 703 ntBASIC6.16□□□□□ -1.42
USP47Q96K76 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP47Q96K76 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP47Q96K76 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.15□□□□□ -1.42
USP47Q96K76 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
USP47Q96K76 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.42
USP47Q96K76 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.15□□□□□ -1.43
USP47Q96K76 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
USP47Q96K76 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
USP47Q96K76 SNORA37-201ENST00000384504 129 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 MIR23A-201ENST00000385245 73 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 AC004448.2-201ENST00000422360 586 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.15□□□□□ -1.43
USP47Q96K76 AC011998.1-201ENST00000433403 117 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.15□□□□□ -1.43
USP47Q96K76 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.15□□□□□ -1.43
USP47Q96K76 VN1R32P-201ENST00000452234 905 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.15□□□□□ -1.43
USP47Q96K76 AC100871.1-201ENST00000507871 1456 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 RNU6-513P-201ENST00000516104 104 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC6.15□□□□□ -1.43
USP47Q96K76 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.15□□□□□ -1.43
USP47Q96K76 AL513548.1-201ENST00000562904 1724 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 MIR3138-201ENST00000585238 82 ntBASIC6.15□□□□□ -1.43
USP47Q96K76 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.15□□□□□ -1.43
USP47Q96K76 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.15□□□□□ -1.43
USP47Q96K76 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP47Q96K76 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP47Q96K76 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
USP47Q96K76 AL078604.1-201ENST00000404609 466 ntBASIC6.14□□□□□ -1.43
USP47Q96K76 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC6.14□□□□□ -1.43
USP47Q96K76 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.14□□□□□ -1.43
USP47Q96K76 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.14□□□□□ -1.43
USP47Q96K76 AC108022.1-201ENST00000493466 478 ntBASIC6.14□□□□□ -1.43
USP47Q96K76 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
USP47Q96K76 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.14□□□□□ -1.43
USP47Q96K76 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.14□□□□□ -1.43
USP47Q96K76 AC090515.3-201ENST00000560431 315 ntBASIC6.14□□□□□ -1.43
USP47Q96K76 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.14□□□□□ -1.43
USP47Q96K76 BNIP3P22-201ENST00000593399 556 ntBASIC6.14□□□□□ -1.43
USP47Q96K76 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.14□□□□□ -1.43
USP47Q96K76 AC091979.2-201ENST00000607514 214 ntBASIC6.14□□□□□ -1.43
USP47Q96K76 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
USP47Q96K76 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP47Q96K76 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
USP47Q96K76 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.14□□□□□ -1.43
USP47Q96K76 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
USP47Q96K76 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC6.13□□□□□ -1.43
USP47Q96K76 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.13□□□□□ -1.43
USP47Q96K76 MIR23B-201ENST00000384832 97 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 MIR195-201ENST00000385194 87 ntBASIC6.13□□□□□ -1.43
USP47Q96K76 MIR134-201ENST00000385258 73 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms