Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 DDX39BP2-208ENST00000453923 258 ntBASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 ICE2P1-201ENST00000512800 1849 ntBASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AL513548.1-201ENST00000562904 1724 ntBASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AC073091.2-201ENST00000603205 907 ntBASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AL354984.3-201ENST00000604803 325 ntBASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AL121890.3-201ENST00000618494 516 ntBASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.61□□□□□ -1.67
SHROOM3Q8TF72 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 OR4K17-201ENST00000315543 1032 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RNU6-525P-201ENST00000363685 104 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 ST13P16-201ENST00000401760 781 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AL121878.1-201ENST00000418638 859 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RPS27AP15-201ENST00000447672 466 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RPS27AP17-201ENST00000463344 455 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC006499.6-201ENST00000511169 607 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC023575.1-201ENST00000580510 358 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 CPHL1P-201ENST00000461341 3407 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 MIR195-201ENST00000385194 87 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RNA5SP397-201ENST00000391323 118 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AL732292.1-201ENST00000426692 226 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RPL34P6-201ENST00000432390 345 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 CEACAMP6-201ENST00000452007 574 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 NPM1P41-201ENST00000512920 831 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 MIR4715-201ENST00000584117 79 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 RPL12P25-202ENST00000598100 674 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 BNIP3P11-201ENST00000603878 563 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 AL603750.1-201ENST00000624216 1717 ntBASIC4.6□□□□□ -1.67
SHROOM3Q8TF72 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AC107068.1-201ENST00000563286 4218 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AC005261.6-201ENST00000623072 1387 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AC008280.1-201ENST00000418851 412 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AC117434.1-201ENST00000419971 836 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 TRAV8-5-201ENST00000537369 341 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AC124068.1-201ENST00000563131 678 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 MIR4286-201ENST00000580651 93 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AC069061.3-201ENST00000582254 823 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 KPNA2P3-201ENST00000584190 848 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AP002360.3-201ENST00000607673 710 ntBASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM3Q8TF72 TCP1P3-201ENST00000414406 1498 ntBASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms