Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 RNU1-19P-201ENST00000363306 165 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 U3.7-201ENST00000363668 216 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 RNU6-931P-201ENST00000363850 107 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 SNORA58B-201ENST00000364259 136 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 DPPA2P2-201ENST00000418220 897 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 VN1R108P-201ENST00000431580 830 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AL117351.1-201ENST00000438864 766 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC104685.1-201ENST00000502445 371 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC147055.4-201ENST00000504399 745 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 RN7SKP31-201ENST00000516354 278 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AKIRIN1P1-201ENST00000547384 544 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AP005136.1-201ENST00000579765 429 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 VN1R90P-201ENST00000595717 726 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC095055.1-201ENST00000603472 1113 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC004948.1-201ENST00000609858 672 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC008083.4-201ENST00000615076 444 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 AC018445.2-201ENST00000622987 260 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 TCP11X1-202ENST00000622971 1372 ntBASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SYNPOQ8N3V7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNPOQ8N3V7 DBF4P1-201ENST00000412976 1892 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 USP9YP4-201ENST00000424401 1745 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 TTC41P-205ENST00000551270 3963 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SYNPOQ8N3V7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SYNPOQ8N3V7 SNORA4.1-201ENST00000364263 144 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 RNU6-115P-201ENST00000364310 107 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 SPTLC1P2-201ENST00000407089 121 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 ELOCP10-201ENST00000440624 327 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 EEF1B2P5-201ENST00000444820 548 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 RPL23AP35-201ENST00000451906 501 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 NF1P3-201ENST00000457709 450 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC073594.1-201ENST00000462065 364 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 RN7SL352P-201ENST00000466002 277 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 RPL23AP40-201ENST00000487630 390 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 COX6B1P2-201ENST00000489624 230 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 AOX3P-204ENST00000491025 2107 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 OR7E157P-201ENST00000494376 911 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 GAPDHP62-201ENST00000515313 990 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 RNU6-678P-201ENST00000516832 109 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 MIR3915-201ENST00000578518 97 ntBASIC6□□□□□ -1.45
SYNPOQ8N3V7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6□□□□□ -1.45
SYNPOQ8N3V7 RNU4ATAC-201ENST00000580972 127 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms