Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SMARCE1P4-201ENST00000523647 241 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC008147.3-201ENST00000548666 354 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC063949.1-201ENST00000552900 865 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 MIR3667-201ENST00000581025 74 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 MIR4270-201ENST00000581799 70 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 RN7SL52P-201ENST00000584271 284 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC110743.1-201ENST00000584870 478 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SCXQ7RTU7 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AL161616.1-201ENST00000611867 286 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 RN7SL722P-201ENST00000617780 284 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCXQ7RTU7 RN7SL565P-201ENST00000618246 284 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCXQ7RTU7 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SCXQ7RTU7 AC012618.3-205ENST00000637896 1496 ntBASIC3.21□□□□□ -1.9
SCXQ7RTU7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AL592437.2-201ENST00000421655 2434 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC016397.1-201ENST00000412463 242 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 GLUD1P9-201ENST00000420997 1173 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC006065.1-201ENST00000422539 802 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 OR7E125P-201ENST00000443450 846 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 TPT1P13-201ENST00000449760 499 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 IGHV5-78-201ENST00000450948 295 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 HMGB3P21-201ENST00000452483 547 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC091180.1-201ENST00000462104 372 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC073358.1-201ENST00000505671 684 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 OR7H2P-201ENST00000513483 306 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 BGLT3-201ENST00000564523 994 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 MIR4737-201ENST00000583979 81 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 EIF1P5-201ENST00000585002 234 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 FAM60CP-201ENST00000591086 664 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AC084373.1-201ENST00000603311 235 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 AP005432.2-201ENST00000608162 586 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 uc_338.18-201ENST00000615451 175 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 MIR6715B-201ENST00000637172 77 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.2□□□□□ -1.9
SCXQ7RTU7 A2MP1-204ENST00000566278 4130 ntBASIC3.2□□□□□ -1.9
SCXQ7RTU7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCXQ7RTU7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 OR51H2P-202ENST00000641424 3046 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 SYT14P1-202ENST00000600441 1448 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC006210.2-201ENST00000367074 1545 ntBASIC3.19□□□□□ -1.9
SCXQ7RTU7 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.19□□□□□ -1.9
SCXQ7RTU7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCXQ7RTU7 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms