Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RPL23AP53-201ENST00000521854 457 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC004923.2-201ENST00000529649 369 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL356057.1-201ENST00000533798 831 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC027455.1-201ENST00000574104 594 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 PIGPP4-201ENST00000584447 307 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 SNX6P1-201ENST00000601728 1224 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC021171.1-201ENST00000603137 706 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC105254.2-201ENST00000603636 436 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AP000894.4-201ENST00000610185 483 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC078883.4-201ENST00000623218 367 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 BX649567.1-201ENST00000642071 1134 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL390862.1-201ENST00000635467 1469 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 CUL4AP1-201ENST00000514750 1863 ntBASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
ZNF549Q6P9A3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 OR5H2-201ENST00000355273 945 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 RNU6-1331P-201ENST00000363658 106 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 SKINT1L-201ENST00000401057 817 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 RN7SKP229-201ENST00000410465 302 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 QRSL1P2-201ENST00000418582 964 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 REREP1Y-201ENST00000422655 198 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 OR5M12P-201ENST00000423388 929 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 RHOT1P3-201ENST00000436571 331 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 REREP2Y-201ENST00000439103 200 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 KATNBL1P3-201ENST00000443475 909 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 TPT1P1-201ENST00000458495 518 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC097484.1-201ENST00000471148 389 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 SNRPCP2-201ENST00000504370 475 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC118465.1-201ENST00000513820 1271 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC067904.2-201ENST00000517322 1283 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 KCTD9P6-201ENST00000522306 950 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AP003033.1-201ENST00000527244 415 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 ZNF971P-201ENST00000562068 1249 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AGGF1P6-201ENST00000569213 976 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC010547.7-201ENST00000570323 333 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 MIR1269B-201ENST00000580405 75 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC010487.1-201ENST00000594408 1172 ntBASIC4.97□□□□□ -1.61
ZNF549Q6P9A3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms